Gene Information

Name : EcE24377A_3389 (EcE24377A_3389)
Accession : YP_001464387.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3410890 - 3411438 bp
Length : 549 bp
Strand : -
Note : identified by glimmer

DNA sequence : 
ATGCAGATAACCGAAGCATTACTTGCAGAGCCGGGAGACATCCGGCGTTTTGTTCAGCAGGCGGTGGACCACTGGCCACA
TCTGTTGGCATTTCGTTTCACTCTCCGTTCGGCAGAAGGAAGCATCAACGGGCAACAGATTCAGGTATTCTGTACTTCTT
TTTACCGACAGGTGCACGAACGTATTACTGAGAGTAATCACATGCTCAGTCCATCCTCGCCGGTGGTATTACGCTGGTTG
CAGGAACAACATGGAGGGGCAACAATACGATGCCTGTTGCTGCTCAGCCAGGATCTTTTCTGCCATCCGCGAGCCAGTGC
CACGGTTGATGAAGCATGTTCACAACTGGTAGATTTACTGCAACAGACCTGGCAGGTGATAAGCGCTGGCGGACAATGCC
GGGTGGAAAAGCGTTTTCAGGTCGCCCGGGGTGATACATCTGGCCAGTATGTTGCGTTAAAAACAGTCGCATTGTCTCTG
GGGTTACCGGTTGTGACCGCCATTATCTATCGTCCGGTACAGCGCTGTACATTGATTACAGCTCAGTGA

Protein sequence : 
MQITEALLAEPGDIRRFVQQAVDHWPHLLAFRFTLRSAEGSINGQQIQVFCTSFYRQVHERITESNHMLSPSSPVVLRWL
QEQHGGATIRCLLLLSQDLFCHPRASATVDEACSQLVDLLQQTWQVISAGGQCRVEKRFQVARGDTSGQYVALKTVALSL
GLPVVTAIIYRPVQRCTLITAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42059.1 hypothetical protein Not tested PAI II 536 Protein 4e-69 83
z1194 AAT48702.1 hypothetical protein Not tested PAI II 4787 Protein 1e-48 73
Z1194 NP_286729.1 hypothetical protein Not tested TAI Protein 3e-55 73
Z1634 NP_287137.1 hypothetical protein Not tested TAI Protein 3e-55 73
z1194 CAC43420.1 hypothetical protein Not tested PAI III 536 Protein 1e-47 72
ECO111_3777 YP_003236112.1 hypothetical protein Not tested LEE Protein 1e-46 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcE24377A_3389 YP_001464387.1 hypothetical protein VFG1578 Protein 2e-69 83
EcE24377A_3389 YP_001464387.1 hypothetical protein VFG1638 Protein 6e-48 72