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Name : EcE24377A_3371 (EcE24377A_3371) Accession : YP_001464372.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Unknown Product : DnaB family helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 3393100 - 3394467 bp Length : 1368 bp Strand : - Note : identified by similarity to SP:P0ACB0; match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665 DNA sequence : ATGGCTGAAGTGTCAGTTCTCTGTGCATACGAAGCAGAGCAGGCCGTTCTGGGGGGCCTGATGCTGGAGAATGAACGCTG GGATGAAGTGGTGCTGATGCTGAGTCCTGACGATTTTTATGTGGCTCAGCACCGGGCCATTTTCCGAGCCATGTCTGAAC TGGCGGTGAATGGCCAGCCTCTGGACCTGATTACACTGTCAGAGCATCTGGAACATCAGGGCAGGCTGGACGTACTGGGC GGTTTTGCTTATCTGGCCGAGCTCAGCAAGAACACACCTTCTGCGGCCAACATCATGGCCTATGCAGGCATTGTGGTGGA GAAGAGCGTTCTGCGTCAGTTACAGGCCACCGGAAACACCCTGATTGCTGATGTGGCGGCACCGAACGCCACATCACGGG ATGTGCTGGATACAGCAGAGCGGCGTCTGTTTGCGCTTGCTCAGAACAGGACGCTCCGGGAGCGCACGGAAGCCTCTCTT TCATCCGCGCTCGATACCGTTCTGCAACAACTGGAAAGTGTGCTCGGTTCCGGCGGTGTGACCGGTACCCCCACGGGATT TGACTGTCTGGATGAAATGACCTGTGGCCTGCAGCCCGGTGACCTGGTCCTGCTGGCTGCCCGTCCGTCAATGGGGAAAA CTTCTCTGGCGCTGTCCATGTGTCTCAGCGCCGCCCGGCGACGGACAGAAGAGAGCGTTCTGGTATTCAGCATTGAGATG CCGAAGGAGCAACTGATTCTGCGCATGCTTTCCATGCTGGGACGTGTGGAACTGAATCATCTGCGCAGTGGCAACATGGA TGATGAGGACTGGGCGAGGGTGTCATCTGCGGTTGGCATGGCGCTGGGTGACGGAGGAATGGGGTCTCTGGGGGAGCGCC TGATAATTGATGACTGCAGCCAGCAGACACCGTCATCACTGCGTGCCAGTGCCCGCCGTTATACCCGCCTGTACGGTAAA CCCGCTCTGATTATGGTGGATTATCTGCAGCTGATTCGTGCGCCGGAGCTGGAGAACCGCACTCAGGAAATTGCTGAAAT TTCCCGTTCCCTGAAAGCGCTGGGGAAGGAGCTGGGATGCCCGGTGCTGGCCCTCTCCCAGCTTAACCGTCAGGTGGAAC AGCGTGCAGATAAACGCCCCAATAACGGTGACCTGCGTGATTCCGGGGCACTGGAGCAGGATGCTGACCTGATTATGTTT ATTTACCGCGACGAGGTCTATAACCCCGATTCACTGGCAAAGGGGGAGGCTGAAATCATTGTCAGCAAGCAGCGTCAGGG GCCCACAGGCACGGTGCGGGTCAGGTTCGACGGTCGTTACACACTGTTTACGCCCTCTGAAAATGACGGACAGGGAGGAT ATGCGTGA Protein sequence : MAEVSVLCAYEAEQAVLGGLMLENERWDEVVLMLSPDDFYVAQHRAIFRAMSELAVNGQPLDLITLSEHLEHQGRLDVLG GFAYLAELSKNTPSAANIMAYAGIVVEKSVLRQLQATGNTLIADVAAPNATSRDVLDTAERRLFALAQNRTLRERTEASL SSALDTVLQQLESVLGSGGVTGTPTGFDCLDEMTCGLQPGDLVLLAARPSMGKTSLALSMCLSAARRRTEESVLVFSIEM PKEQLILRMLSMLGRVELNHLRSGNMDDEDWARVSSAVGMALGDGGMGSLGERLIIDDCSQQTPSSLRASARRYTRLYGK PALIMVDYLQLIRAPELENRTQEIAEISRSLKALGKELGCPVLALSQLNRQVEQRADKRPNNGDLRDSGALEQDADLIMF IYRDEVYNPDSLAKGEAEIIVSKQRQGPTGTVRVRFDGRYTLFTPSENDGQGGYA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-108 | 59 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-115 | 58 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 2e-115 | 58 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-118 | 56 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-103 | 55 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 4e-103 | 55 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 9e-90 | 50 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 2e-96 | 48 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 4e-85 | 45 |
