|
Name : EcE24377A_0330 (EcE24377A_0330) Accession : YP_001461483.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Unknown Product : IS1, transposase orfB Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1662 EC number : - Position : 356321 - 356824 bp Length : 504 bp Strand : + Note : identified by match to protein family HMM PF03400 DNA sequence : ATGCCGGGCAACAGCCCGCATTATGGGCGTTGGCCTCAACACGATTTTACGTCACTTAAAAAACTCAGGCCGCAGTCGGT AACCTCGCGCATACAGCCGGGCAGTGACGTCATCGTCTGCGCGGAAATGGACGAACAGTGGGGCTATGTCGGGGCTAAAT CGCGCCAGCGCTGGCTGTTTTACGCGTATGACAGGCTCCGGAAGACGGTTGTTGCGCACGTATTCGGTGAACGCACTATG GCGACGCTGGGGCGTCTTATGAGCCTGCTGTCACCCTTTGACGTGGTGATATGGACGACGGATGGCTGGCCGCTGTATGA ATCCCGCCTGAAAGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGC AGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAT CTGAACATAAAACACTATCAATAA Protein sequence : MPGNSPHYGRWPQHDFTSLKKLRPQSVTSRIQPGSDVIVCAEMDEQWGYVGAKSRQRWLFYAYDRLRKTVVAHVFGERTM ATLGRLMSLLSPFDVVIWTTDGWPLYESRLKGKLHVISKRYTQRIERHNLNLRQHLARLGRKSLSFSKSVELHDKVIGHY LNIKHYQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EC042_4085 | YP_006098368.1 | transposase | Not tested | Tn2411 | Protein | 3e-75 | 98 |
| EC042_4113 | YP_006098397.1 | transposase | Not tested | Tn2411 | Protein | 3e-75 | 98 |
| insB | NP_458736.1 | insertion element IS1 protein InsB | Not tested | SPI-7 | Protein | 3e-75 | 98 |
| InsB (Tn1) | CAJ77072.1 | Transposase | Not tested | AbaR1 | Protein | 1e-72 | 97 |
| insB | ADD91744.1 | transposase | Not tested | PAI-I AL862 | Protein | 1e-73 | 94 |
| Z1192 | NP_286727.1 | IS1 protein InsB | Not tested | TAI | Protein | 7e-72 | 92 |
| Z1632 | NP_287135.1 | IS1 protein InsB | Not tested | TAI | Protein | 7e-72 | 92 |
| insB | NP_709463.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-55 | 91 |
| S4059 | NP_839227.1 | IS1 orfB | Not tested | SHI-2 | Protein | 4e-71 | 90 |
| tnpH | AAD44742.1 | TnpH | Not tested | SHI-2 | Protein | 3e-71 | 90 |
| insB | NP_709451.1 | IS1 ORF2 | Not tested | SHI-2 | Protein | 2e-69 | 89 |
| aec38 | AAW51721.1 | InsB | Not tested | AGI-3 | Protein | 2e-56 | 89 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcE24377A_0330 | YP_001461483.1 | IS1, transposase orfB | VFG0612 | Protein | 6e-70 | 89 |
