Gene Information

Name : eprK (EcE24377A_3177)
Accession : YP_001464192.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Virulence
Product : type III secretion apparatus lipoprotein EprK
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4669
EC number : -
Position : 3193251 - 3193985 bp
Length : 735 bp
Strand : -
Note : identified by match to protein family HMM PF01514; match to protein family HMM TIGR02544

DNA sequence :
ATGAAATATATATCATTATTATTGTTTATCCTGCTGTTGTGCGGCTGCAAGCAGCAGGAATTATTGAACCATCTTGATCA
ACAGCAAGCTAATGATGTCCTTGCTGTTTTACAAAGACATAATATTAATGCTGAAAAGAAGGATCAAGGCAAAACAGGAT
TTTCAATATTTGTCGAACCAACGGATTTTGCTTCTGCGGTGGATTGGCTAAAAATCTACAATCTACCGGGTAAGCCTGAT
ATTCAAATATCGCAGATGTTCCCTGCAGATGCACTCGTTTCATCTCCACGAGCGGAAAAAGCAAGGCTATATTCTGCTAT
TGAGCAGCGGTTAGAGCAATCTCTCAAAATTATGGATGGCATTATTTCTTCGAGAGTACATGTTAGTTACGATGTTGATA
ATGGCGATAGTGGTAAAACTGCTTTACCAATTCATATTTCTGTACTTGCAGTATATGAAAAAGATATCAACCCAGAAATA
AAAATAAATGATATCAAGAGATTTATTGTTAATAGCTCTGCAAGCGTACAATATGAAAATATTTCTGTTGTATTGTCAAA
ACGAAGAGACATTATTGAGCAAGCACCAACATATGAAATTAGCGAACCTGTTTTTGCTTATGATAAGGCTATGCCGGTTT
CTATCTTACTTGCATTAATATCCGTAGCGACTTGCTGGCTGTTATGGAAGTATAGGGCCATTCTAACTAATTTAGTCAGG
TTGAAAATTAAGTAG

Protein sequence :
MKYISLLLFILLLCGCKQQELLNHLDQQQANDVLAVLQRHNINAEKKDQGKTGFSIFVEPTDFASAVDWLKIYNLPGKPD
IQISQMFPADALVSSPRAEKARLYSAIEQRLEQSLKIMDGIISSRVHVSYDVDNGDSGKTALPIHISVLAVYEKDINPEI
KINDIKRFIVNSSASVQYENISVVLSKRRDIIEQAPTYEISEPVFAYDKAMPVSILLALISVATCWLLWKYRAILTNLVR
LKIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
eprK AAZ31284.1 EprK Virulence ETT2 Protein 2e-106 100
ECs3716 NP_311743.1 EprK Not tested LIM Protein 6e-105 99
prgK NP_806474.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 1e-53 55
prgK YP_217790.1 cell invasion protein Virulence SPI-1 Protein 4e-53 55
prgK NP_461792.1 needle complex inner membrane lipoprotein Virulence SPI-1 Protein 4e-53 55
prgK NP_457265.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 1e-53 55
prgK AAS66872.1 PrgK Virulence SSR-2 Protein 3e-50 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
eprK YP_001464192.1 type III secretion apparatus lipoprotein EprK VFG0533 Protein 2e-53 55
eprK YP_001464192.1 type III secretion apparatus lipoprotein EprK VFG0998 Protein 8e-43 45
eprK YP_001464192.1 type III secretion apparatus lipoprotein EprK VFG1787 Protein 6e-36 42