Gene Information

Name : EcE24377A_2933 (EcE24377A_2933)
Accession : -
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Unknown
Product : -
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2941133 - 2942672 bp
Length : 1540 bp
Strand : +
Note : IS66 family element, transposase, authentic frameshift; this gene contains a frame shift which is not the result of sequencing error; identified by match to protein family HMM PF03050

DNA sequence :
ATGAACGACATCTCTTCTGACGACATCTTCCTGCTGAAACAGCGCCTGGCCGAACAGGAAGCGCTGATCCACGCCCTGCA
GGAAAAGCTGAGCAACTGGGAGCGCGAAATAGACCATCTGCAGGCGCAGCTGGATAAACTCCGCCGGATGAACTTCGGCA
GTCGTTCCGAAAAAGTCTCCCGCCGTATCGCACAAATGGAAGCCGATCTGAACCGGCTTCAGAAAGAGAGCGATACGCTG
ACTGGTAGGGTGTATGACCCGGCTGTACAGCGTCCGTTGCGTCAGACCCGCACCCGTAAGCCGTTCCCTGAATCACTACC
CCGTGACGAAAAGCGACTGTTGCCTGCGGCGCCGTGCTGCCCGAACTGCGGCGGTTCACTGAGCTATCTGGGCGAGGATA
CCGCCGAACAGCTGGAGTTGATGCGTAGTGCCTTCCGGGTTATCCGGACGGTACGGGAAAAAACATGCCTGTACTCAGTG
CGATGCCATCGTGCAGGCACCTGCACCTTCGCGGCCCATCGAGCGGGGTATCGCCGGACCGGGGCTGCTGGCCCGCGTGC
TGACCTCGAAGTATGCAGAGCACACCCCGCTGTATCGCCAGTCAGAAATATACGGCCGGCAAGGTGTGGAGCTGAGCCGT
TCACTGCTGTCGGGCTGGGTGGATGCATGCTGCCGGCTGCTGTCTCCGCTGGAAGAGGCGCTTCATGGCTATGTCATGAC
TGACGGCAAACTCCATGCCGATGATACCCCGGTCCAGGTACTGCTGCCGGGTAATAAGAAGACGAAGACCGGGCGGTTGT
GGGCGTATGTTCGTGATGACCGCAATGCCGGGTCAGCGTTGGCACCTGCAGTGTGGTTCGCTTACAGCCCGGACAGAAAA
GGCATCCATCCGCAGACTCATCTTGCCTGCTTCAGCGGTGTGCTGCAAGCGGATGCGTACGCCGGGTTCAACGAGCTGTA
TCGCAATGGTGGGATAACGGAAGCTGCCTGCTGGGCTCATGCCCGCCGAAAGATCCACGATGTGCACGTCCGCATCCCGT
CAGCACTGACGGAAGAAGCCCTGGAGCAGATCGGTCAGTTGTACGCCATAGAGGCGGATATAAGGGGAATGCCGGCAGAG
CAGCGGCTTGCTGAACGTCAGCGAAAAACGAAACCGCTGTTGAAATCCCTGGAAAGCTGGTTGCGTGAAAAGATGAAAAC
CCTGTCGCGACACTCAGAACTGGCGAAAGCGTTCGCATACGCCCTGAACCAGTGGCCGGCGCTGACGTACTATGCAGATG
ATGGCTGGGCTGAGGCGGACAATAACATCGCTGAAAATGCGTTGCGGATGGTCAGTCTGGGCCGCAAAAACTACCTGTTC
TTCGGTTCGGATCATGGAGGAGAGCGGGGAGCGCTGCTGTACAGCCTGATCGGGACGTGCAAACTGAACGGAGTGGAGCC
AGAAAGCTACCTCCGCTATGTCCTTGACGTCATAGCCGACTGGCCGATAAACCGGGTCGGCGAACTGCTCCCCTGGCGCG
TAGCACTGCCGACTGAATAA

Protein sequence :
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL08460.1 unknown Not tested SRL DNA 0.0 98.5
Z1131 NP_286666.1 hypothetical protein Not tested TAI DNA 0.0 97.2
Z1570 NP_287074.1 hypothetical protein Not tested TAI DNA 0.0 97.2
unnamed AAC31494.1 L0015 Not tested LEE DNA 0.0 97.2
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 DNA 0.0 97.2
Z5098 NP_290249.1 prophage-associated protein Not tested LEE DNA 0.0 97.2
ECs4547 NP_312574.1 hypothetical protein Not tested LEE DNA 0.0 97.2
unnamed CAC39285.1 hypothetical protein Not tested LPA DNA 0.0 97.2
unnamed ACU09439.1 IS66 family element transposase Not tested LEE DNA 0.0 97.1
unnamed AAL57570.1 unknown Not tested LEE DNA 0.0 97
unnamed - - Not tested LEE DNA 0.0 96.9
unnamed CAI43806.1 hypothetical protein Not tested LEE DNA 0.0 96.9
ECO26_5299 - - Not tested LEE DNA 0.0 96.9
tnp AEA34686.1 transposase Not tested Not named DNA 0.0 96.8
st57 CAC81895.1 ST57 protein Not tested LEE II DNA 0.0 96.7
ECUMN_3329 - - Not tested Not named DNA 0.0 93.3
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 DNA 0.0 93.3