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Name : EcE24377A_2632 (EcE24377A_2632) Accession : YP_001463683.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Virulence Product : fimbrial usher family protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 2622876 - 2625521 bp Length : 2646 bp Strand : - Note : identified by match to protein family HMM PF00577 DNA sequence : ATGCCTGACCATTCTCTTTTTCGATTACGGATTCTTCCGTGGTGCATTGCGCTGGCAATGTCAGGGAGTTATAGCAGTGT CTGGGCTGAAGACGACATTCAGTTTGATTCCCGTTTTCTGGAATTAAAAGGCGACACAAAAATTGATCTGAAGCGTTTTT CCAGCCAGGGATATGTTGAGCCCGGAAAATACAATTTACAGATTCAACTAAATAAACAGCCATTGGCGGAAGAGTACGAT ATTTACTGGTATGCTGGTGAAGATGACGCGAGCAAAAGCTATGCTTGTCTGACACCGGAACTGGTAGCGCAGTTTGGTTT AAAAGAAGACGTGGCGAAAAATCTGCAATGGAGCCACGATGCTAAATGCCTGAAATCCGGTCAACTGGAAGGCATGGAAA TTAAGGCTGATTTAAGCCAGTCCGCATTAGTCATTTCACTACCGCAGGCTTACCTCGAATATACCTGGCCCGACTGGGAT CCGCCTTCACGTTGGGATGACGGCATTTCCGGGATCGTCGCGGACTACAGCATCAACGCACAAACCCGGCACGAAGAAAA TGGCGGTGATGATAGTAACGAGATCAGCGGCAACGGGACGGTCGGGGTTAACCTGGGGCCGTGGCGTATGCGTGCTGACT GGCAGACTAACTATCAACATACTCGCAGTAATGATGATGACGATGAATTCAGCGGCGATGAAACTCAAAAAAAATGGGAG TGGAGTCGCTACTATGCCTGGCGGGCGTTACCATCATTAAAAGCCAAACTGGCGCTGGGCGAGGATTACCTCAGATCCGA TATTTTTGATGGTTTTAACTATGTTGGTGGCAGTGTCAGTACTGACGATCAAATGTTGCCTCCCAATCTGCGCGGCTACG CGCCAGACATTTCCGGCGTGGCACACACCACAGCAAAAGTGACCGTCAGCCAGATGGGGCGTGTGATTTACGAAACGCAG GTTCCGGCTGGACCGTTTCGTATTCAGGATCTTGGTGATTCTGTCTCCGGTACGTTGCATATTCGCATTGAAGAACAGAA CGGCCAGGTGCAGGAATATGACATCAGCACCGCCTCGATGCCATACCTCACTCGTCCAGGTCAGGTTCGCTATAAGATCA TGATGGGCCGTCCGCAAGAGTGGGGACACCATGTCGAGGGTGAATTTTTTTCTGGTGCTGAAGCTTCCTGGGGGATCGCT AACGGCTGGTCGTTATATGGCGGCGCACTGGGAGATGAAAACTATCAGTCTGCGGCGCTTGGCGTCGGTCGCGATTTGTC TACATTCGGCGCGGTCGCGTTTGATGTTACTCACTCGCACACCAAACTGGATAAAGACACCGCTTATGGCAAAGGTTCGC TGGACGGTAACTCCTTCCGTGTGAGTTATTCCAAAGACTTTGACCAGCTCAACAGCCGCGTTACTTTTGCTGGATATCGC TTCTCGGAAGAGAACTTTATGACCATGAGCGAGTATCTGGATGCCAGTGACAGCGGAATGGTACGCACGGGCAACGACAA AGAGATGTACACCGCCACTTATAACCAGAACTTCCGCGATGCGGGTGTTTCGGTTTATCTCAACTATACCCGCCATACCT ACTGGGATCGCGAGGAGCAGACAAACTACAACATCATGCTCTCGCACTATTTCAATATGGGCAGTATTCGTAATGTCAGC ATCTCGATGACTGGCTACCGTTACGAGTATGACAACCGGGAGGATAAGGGTATGTACATTTCTCTCAGTATGCCGTGGGG TGACAACAGTACCGTTAGCTATAACGGTAACTATGGCAGTGGGACGGACAGCAGCCAGGTCGGTTATTTCAGCCGTGTCG ATGACGCGACTCACTATCAGTTGAACGTCGGCACCAGCGACAAACACACCAGCGTTGATGGCTATTACAGCCATGATGGT TCGCTGGCGCAGGTTGACCTCAGTGCGAACTACCATGAAGGGCAATACACCTCTGCGGGCTTGTCGTTACAGGGCGGCGC AACGCTTACTGCCCACGGTGGCGCACTTCACCGTACCCAGAATATGGGCGGGACACGCTTGTTGATTGATGCCGATGGCG TTGCCGATGTTCCGGTGGAAGGTAACGGTGCTGCTGTTTATACCAATATGTTTGGTAAAGCCGTCGTTTCTGACGTCAAT AACTATTACCGCAATCAGGCGTATATCGACCTCAACAAATTGCCGGAAAACGCCGAAGCAACCCAGTCGGTGGTGCAAGC CACGCTAACTGAAGGTGCCATTGGCTACCGTAAATTTGCTGTCATTAGCGGACAAAAAGCGATGGCGGTGCTGCGCCTGA GCGACGGCAGCCATCCTCCGTTTGGCGCAGAAGTAAAAAATGATAACGAGCAGACAGTGGGCCTTGTCGATGATGACGGC AATGTTTATCTGGCTGGGGTGAAACCTGGCGAACACATGAGTGTGTTCTGGAGTGGTATTGCGCATTGCGATATCAACCT GCCGGCCCCGCTGCCTGCCGATCTGTTTAACGGCTTGTTACTGCCATGCCAGCATAAAGGCAACGTCGTGCCGGTTGTTC CTGATGGCATAAAGCCTGTCATTCAGGAGCAGACGCAACAGGTGACACCCACCAATCCCCCTGTTTCTGTTTCAGCTAAC CAATAA Protein sequence : MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKGDTKIDLKRFSSQGYVEPGKYNLQIQLNKQPLAEEYD IYWYAGEDDASKSYACLTPELVAQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTWPDWD PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNYQHTRSNDDDDEFSGDETQKKWE WSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGGSVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQ VPAGPFRIQDLGDSVSGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQVRYKIMMGRPQEWGHHVEGEFFSGAEASWGIA NGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGKGSLDGNSFRVSYSKDFDQLNSRVTFAGYR FSEENFMTMSEYLDASDSGMVRTGNDKEMYTATYNQNFRDAGVSVYLNYTRHTYWDREEQTNYNIMLSHYFNMGSIRNVS ISMTGYRYEYDNREDKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGTSDKHTSVDGYYSHDG SLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMGGTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVN NYYRNQAYIDLNKLPENAEATQSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDDG NVYLAGVKPGEHMSVFWSGIAHCDINLPAPLPADLFNGLLLPCQHKGNVVPVVPDGIKPVIQEQTQQVTPTNPPVSVSAN Q |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 1e-145 | 44 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 9e-146 | 44 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 8e-146 | 44 |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 6e-152 | 44 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 7e-146 | 43 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 1e-144 | 43 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 8e-145 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcE24377A_2632 | YP_001463683.1 | fimbrial usher family protein | VFG0884 | Protein | 4e-146 | 44 |
| EcE24377A_2632 | YP_001463683.1 | fimbrial usher family protein | VFG0895 | Protein | 4e-146 | 44 |
| EcE24377A_2632 | YP_001463683.1 | fimbrial usher family protein | VFG1548 | Protein | 4e-146 | 43 |
