Gene Information

Name : ldcA (EcE24377A_1337)
Accession : YP_001462442.1
Strain : Escherichia coli E24377A
Genome accession: NC_009801
Putative virulence/resistance : Unknown
Product : L,D-carboxypeptidase A
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1619
EC number : 3.4.17.13
Position : 1332848 - 1333762 bp
Length : 915 bp
Strand : -
Note : catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine

DNA sequence :
ATGTCTCTGTTTCACTTAATTGCCCCATCAGGTTACTGCATTAAACAGCACGCCGCGCTGCGTGGTATCCAGCGCCTTAC
CGACGCGGGGCATCAAGTCAATAACGTCGAGGTTATTGCCCGTCGTTGTGAGCGTTTTGCGGGTACGGAAACAGAGCGTC
TGGAAGATCTCAATTCCCTTGCCAGACTGACTACCCCCAACACCATCGTGCTGGCTGTACGCGGCGGTTACGGTGCCAGT
CGTTTACTGGCAGATATTGACTGGCAGGCACTGGTGGCTCGCCAACAACATGACCCGTTGCTCATTTGCGGACATAGCGA
TTTTACCGCCATTCAGTGCGGTCTTCTGGCGCATGGCAATGTCATCACCTTTAGCGGCCCCATGCTGGTAGCAAACTTTG
GCGCGGATGAACTGAACGCCTTTACCGAGCACCATTTCTGGCTGGCGTTACGCAATGAAACCTTCACCATTGAATGGCAA
GGGGAAGGCCCGACATGTCGGGCCGAAGGCACGTTGTGGGGAGGCAATCTTGCGATGCTGATTTCACTGATCGGTACACC
GTGGATGCCAAAAATTGAGAACGGTATTCTGGTGCTGGAAGATATTAACGAGCACCCTTTCCGCGTCGAACGTATGCTGT
TGCAGCTCTATCATGCGGGAATTTTGCCACGTCAGAAGGCGATTATTCTCGGTAGCTTTAGCGGCAGCACGCCCAATGAT
TATGACGCAGGTTACAACCTGGAGTCAGTGTACGCGTTTTTGCGTTCCCGCCTGTCGATTCCACTCATTACCGGCCTCGA
TTTTGGTCATGAACAACGCACGGTTACGCTGCCGTTGGGCGCACATGCCATTCTGAATAACACCCGGGAAGGCACTCAGT
TGACGATTAGCGGTCATCCTGTTCTTAAAATGTAA

Protein sequence :
MSLFHLIAPSGYCIKQHAALRGIQRLTDAGHQVNNVEVIARRCERFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGAS
RLLADIDWQALVARQQHDPLLICGHSDFTAIQCGLLAHGNVITFSGPMLVANFGADELNAFTEHHFWLALRNETFTIEWQ
GEGPTCRAEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYHAGILPRQKAIILGSFSGSTPND
YDAGYNLESVYAFLRSRLSIPLITGLDFGHEQRTVTLPLGAHAILNNTREGTQLTISGHPVLKM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
f304 AAC61707.1 F304 Not tested PAI I CFT073 Protein 5e-140 98