|
Name : yccZ (EcE24377A_1099) Accession : YP_001462215.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Unknown Product : outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 1123325 - 1124485 bp Length : 1161 bp Strand : - Note : identified by match to protein family HMM PF02563 DNA sequence : TTGACTGATAAATATAAACCAATGAAAAAGAACATTTTTAAGTTTTCGGTACTGACATTGGCTGTTCTGTCTTTGACAGC ATGTACCCTTGTTCCTGGTCAGAATTTATCGACCAGTAACAAGGATGTCATTGAACTACCTGACAATCAGTATGACCTGG ACAAAATGGTCAATATCTATCCCGTCACGCCAGGATTGATTGATCAGTTGCGCGCCAAACCGATTATGTCGCAGGCTAAC CCGGAGCTGGAGCAGCAAATCGCAAACTATGAATATCGTATCGGCATTGGGGATGTGTTGATGGTTACGGTCTGGGATCA CCCGGAACTAACCACCCCCGCAGGGCAATACCGTAGCGCCAGTGATACCGGCAACTGGGTTAACGCCGATGGTGCGATTT TCTACCCCTATATTGGTCGCCTGAAAGTGGCCGGGAAAACACTTACCCAGGTACGCAACGAGATTACAGCGCGTCTGGAT TCAGTCATTGAAAGCCCGCAAGTCGATGTCAGCGTCGCGGCGTTCCGCTCGCAAAAAGCGTACGTCACCGGCGAAGTCAG CAAATCGGGTCAGCAGCCGATTACCAATATTCCTCTGACCATCATGGATGCGATTAACGCCGCGGGCGGTCTGACCGCAG ATGCAGACTGGCGCAACGTGGTGCTCACCCAGAATGGCGTAAAGACCAAAGTGAACCTCTATGCGCTGATGCAGCGTGGC GACTTGCGCCAGAACAAACTGCTGCACCCGGGCGATATTTTATTTATTCCGCGCAACGATGATCTGAAAGTCTTCGTGAT GGGTGAAGTGGGTAAACAGAGCACGCTGAAAATGGACCGCAGCGGTATGACCCTGGCGGAAGCGCTGGGTAACGCTGAGG GTATGAATCAGGATGTCGCTGATGCGACGGGGATTTTTGTTATTCGTGCAACGCAAAACAAGCAGAATGGCAAAATCGCC AATATTTATCAGCTGAATGCGAAGGACGCATCGGCAATGATACTCGGAACGGAATTCCAGCTTGAACCTTACGACATTGT TTATGTCACTACTGCGCCGCTGGCTCGTTGGAACCGTGTGATTTCTCTGCTGGTACCGACGATTTCCGGGGTGCATGACC TGACAGAGACTTCACGGTGGATTCAAACATGGCCCAACTAA Protein sequence : MTDKYKPMKKNIFKFSVLTLAVLSLTACTLVPGQNLSTSNKDVIELPDNQYDLDKMVNIYPVTPGLIDQLRAKPIMSQAN PELEQQIANYEYRIGIGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLD SVIESPQVDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQNGVKTKVNLYALMQRG DLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIA NIYQLNAKDASAMILGTEFQLEPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf39 | AAO18064.1 | Orf39 | Not tested | TTSS locus | Protein | 4e-128 | 67 |
