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Name : fimD2 (EcE24377A_1055) Accession : YP_001462173.1 Strain : Escherichia coli E24377A Genome accession: NC_009801 Putative virulence/resistance : Virulence Product : outer membrane usher protein fimD Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 1077866 - 1080466 bp Length : 2601 bp Strand : + Note : identified by similarity to SP:P30130; match to protein family HMM PF00577 DNA sequence : ATGTATAGAACTCATCGACAACACAGCCTGTTAAGCTCTGGTGGAGTGCCATCGTTTATTGGTGGGCTGGTGGTGTTTGT GTCGGCAGCGTTCAATGCACAAGCTGAAACCTGGTTCGATCCTGCTTTTTTCAAAGATGATCCCTCAATGGTGGCCGATT TGTCTCGTTTCGAAAAAGGACAAAAAATAACGCCAGGGGTTTATCGTGTCGATATTGTTCTGAATCAGACAATTGTAAAT ACGCGCAACGTCAATTTTGTTGAGATAACGCCAGAGAAGGGGATTGCCGCCTGTTTGACGACTGAAAGCCTGGATGCAAT GGGTGTTAATACTGATGCGTTTCCGGCTTTTAAACAACTGGACAAACAAGCGTGTGTGCCATTGGCGGAGATTATTCCGG ATGCCAGCGTAACGTTTAATGTGAATAAACTCCGTCTGGAAATTTCAGTACCGCAAATCGCCATCAAAAGTAATGCCCGT GGTTATGTCCCCCCTGAACGTTGGGATGAAGGGATCAACGCGCTATTACTGGGATATTCGTTTAGCGGGGCTAACAGTAT TCATAGCAGCGCAGACAGTGATTCTGGCGACAGCTATTTTCTGAATTTAAACAGTGGCGTTAATTTAGGCCCATGGAGAT TGCGCAACAATTCAACATGGAGTCGCAGTAGTGGCCAAACCGCAGAATGGAAGAATCTCAGCAGCTATTTGCAGCGGGCG GTTATTCCACTAAAAGGCGAACTGACCGTAGGTGATGATTATACTGCAGGCGATTTTTTCGATAGTGTCAGCTTTCGTGG TGTGCAGCTGGCGTCAGATGACAACATGCTGCCAGACAGCCTGAAAGGGTTTGCGCCTGTGGTGCGTGGTATCGCCAAAA GCAATGCCCAGATAACGATTAAGCAAAATGGTTACACCATTTACCAAACTTATGTATCGCCTGGTGCTTTTGAAATTAGT GATCTCTATTCCACGTCGTCGAGCGGTGATTTGTTAGTTGAAATCAAAGAAGCGGACGGCAGCGTCAATAGCTACAGCGT ACCGTTTTCCAGCGTGCCATTACTCCAGCGTCAGGGGCGAATCAAATACGCGGTGACACTGGCGAAATACAGAACCAATA GTAATGAACAGCAGGAGAGCAAATTTGCCCAGGCCACGTTGCAGTGGGGCGGACCGTGGGGAACGACATGGTATGGTGGT GGACAATATGCTGAATATTACCGTGCCGCCATGTTTGGTCTGGGATTTAACCTTGGCGATTTCGGAGCAATTTCGTTCGA TGCGACCCAGGCGAAGAGTACGCTGGCAGACCAAAGCGAACATAAAGGTCAGTCATATCGTTTTCTGTATGCCAAAACGC TCAACCAATTGGGCACTAATTTTCAATTGATGGGCTATCGCTATTCGACGTCGGGTTTCTACACCCTTTCCGACACCATG TATAAACATATGGATGGCTACGAATTTAATGACGGTGATGATGAAGATACGCCGATGTGGTCGCGTTATTACAATTTGTT TTACACCAAACGTGGCAAACTGCAGGTCAATATCTCCCAGCAATTAGGCGAGTACGGTTCGTTTTATTTAAGTGGTAGCC AGCAAACTTACTGGCATACCGATCAACAGGATCGGCTATTACAGTTTGGCTACAACACGCAAATTAAAGATCTCTCGCTG GGGGTTTCCTGGAACTACAGTAAGTCCCGTGGTCAACCTGATGCTGATCAGGTGTTTGCACTAAATTTTTCCCTGCCGCT CAATCTGTTGCTCCCCAGAAGTAATGATAGCTATACCAGGAAAAAAAATTACGCCTGGATGACCTCTAACACCAGTATCG ATAACGAAGGGCACATTACACAAAACCTGGGTTTAACGGAGACACTACTCGATGACGGTAACCTGAGCTACAGCGTGCAA CAGGGATATAACAGCGAGGGGAAAACGGCTAATGGTAGCGCCAGCATGGACTACAAAGGGGCGTTTGCAGATGCCCGAGT GGGCTACAACTACAGCGATAACGGCAGTCAACAACAACTGAACTACGCTCTTTCAGGCAGTTTAGTTGCCCATTCACAGG GCATTACCCTGGGGCAATCGCTGGGGGAAACTAACGTGCTGATTGCAGCACCAGGCGCAGAGAATACTCGTGTGGCGAAC AGCACCGGGCTGAAAACTGACTGGCGCGGATATACCGTTGTCCCCTATGCCACTTCTTATCGGGAAAATCGAATCGCACT TGATGCGGCATCGTTAAAACGTAACGTGGATCTTGAAAATGCAGTCGTCAACGTGGTTCCCACCAAAGGGGCGTTGGTTC TGGCGGAGTTCAATGCCCATGCGGGAGCAAGGGTATTAATGAAAACATCAAAGCAGGGTATACCGCTGCGTTTTGGCGCG ATAGCGACGCTGGACGGCATACAGACTAATAGCGGCATTATTGATGATGATGGCTCGCTCTATATGTCCGGTTTGCCCGC TCAGGGAGCGATAACTGTACGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAGTTACCAGCTTACCGAACAACAAA TTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAA Protein sequence : MYRTHRQHSLLSSGGVPSFIGGLVVFVSAAFNAQAETWFDPAFFKDDPSMVADLSRFEKGQKITPGVYRVDIVLNQTIVN TRNVNFVEITPEKGIAACLTTESLDAMGVNTDAFPAFKQLDKQACVPLAEIIPDASVTFNVNKLRLEISVPQIAIKSNAR GYVPPERWDEGINALLLGYSFSGANSIHSSADSDSGDSYFLNLNSGVNLGPWRLRNNSTWSRSSGQTAEWKNLSSYLQRA VIPLKGELTVGDDYTAGDFFDSVSFRGVQLASDDNMLPDSLKGFAPVVRGIAKSNAQITIKQNGYTIYQTYVSPGAFEIS DLYSTSSSGDLLVEIKEADGSVNSYSVPFSSVPLLQRQGRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYGG GQYAEYYRAAMFGLGFNLGDFGAISFDATQAKSTLADQSEHKGQSYRFLYAKTLNQLGTNFQLMGYRYSTSGFYTLSDTM YKHMDGYEFNDGDDEDTPMWSRYYNLFYTKRGKLQVNISQQLGEYGSFYLSGSQQTYWHTDQQDRLLQFGYNTQIKDLSL GVSWNYSKSRGQPDADQVFALNFSLPLNLLLPRSNDSYTRKKNYAWMTSNTSIDNEGHITQNLGLTETLLDDGNLSYSVQ QGYNSEGKTANGSASMDYKGAFADARVGYNYSDNGSQQQLNYALSGSLVAHSQGITLGQSLGETNVLIAAPGAENTRVAN STGLKTDWRGYTVVPYATSYRENRIALDAASLKRNVDLENAVVNVVPTKGALVLAEFNAHAGARVLMKTSKQGIPLRFGA IATLDGIQTNSGIIDDDGSLYMSGLPAQGAITVRWGEAPDQICHISYQLTEQQINSAITRMDAICR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fim2D | AFH78429.1 | putative fimbrial usher protein | Virulence | KpGI-5 | Protein | 0.0 | 48 |
| sfaF | CAC16953.2 | SfaF protein | Virulence | PAI III 536 | Protein | 0.0 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fimD2 | YP_001462173.1 | outer membrane usher protein fimD | VFG0876 | Protein | 0.0 | 49 |
| fimD2 | YP_001462173.1 | outer membrane usher protein fimD | VFG0446 | Protein | 3e-180 | 49 |
| fimD2 | YP_001462173.1 | outer membrane usher protein fimD | VFG1645 | Protein | 0.0 | 46 |
| fimD2 | YP_001462173.1 | outer membrane usher protein fimD | VFG0912 | Protein | 0.0 | 46 |
| fimD2 | YP_001462173.1 | outer membrane usher protein fimD | VFG0454 | Protein | 1e-169 | 45 |
