Gene Information

Name : EcHS_A0947 (EcHS_A0947)
Accession : YP_001457684.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Unknown
Product : phage protein gpU
Function : -
COG functional category : R : General function prediction only
COG ID : COG3499
EC number : -
Position : 946310 - 946792 bp
Length : 483 bp
Strand : +
Note : identified by match to protein family HMM PF06995

DNA sequence :
ATGATGGTGCTGGGATTGTACGTGTTTATGCTGCGCACCGTTCCGTATCAGGAACTGCAGTATCAACGCAGCTGGCGACA
TGCGGCAAACAGCCGGGTAAATCGTCGTCCGTCCACGCAGTTTCTGGGACCGGACAACGACATGCTGACGCTTTCCGGTG
TTCTTATGCCGGAGATAACAGGCGGCAGGCTGTCGTTGCTGGCACTGGAGCAGATGGCAGAACAGGGGAAAGCATGGCCC
CTGATTGAAGGCAGCGGCACGATTTACGGCATGTATGTGATTGAGGGACTGAATCAGACTAAAACGGAGTTTTTCCGCGA
CGGTATGCCGCGCCGGATTGAGTTCACCCTGTCGCTCAAACGCGTGGATGAATCCCTGTCCGATATGTTCGGTGATCTCA
GTGCGCAACTGAATAATCTTCAGGACACGGCAACATCTGTCTTAAGCGATATCAGTAAAACGGTGGGAGGGCTGCTGTCG
TGA

Protein sequence :
MMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLGPDNDMLTLSGVLMPEITGGRLSLLALEQMAEQGKAWP
LIEGSGTIYGMYVIEGLNQTKTEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQDTATSVLSDISKTVGGLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4602 NP_458685.1 putative phage tail protein Not tested SPI-7 Protein 4e-64 87
t4296 NP_807893.1 phage tail protein Not tested SPI-7 Protein 4e-64 87
unnamed ABR13489.1 phage-related tail protein Not tested PAGI-6 Protein 3e-35 52