Gene Information

Name : EcHS_A0943 (EcHS_A0943)
Accession : YP_001457680.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Unknown
Product : phage major tail tube protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3498
EC number : -
Position : 942234 - 942749 bp
Length : 516 bp
Strand : +
Note : identified by match to protein family HMM PF04985; match to protein family HMM TIGR01611

DNA sequence :
ATGGCTTTACCACGCAAATTAAAACACCTGAACCTGTTTAATGACGGGAACAACTGGCAGGGGATCGTTGAGTCGCTGAC
GCTGCCGAAATTCACCCGCAAATATGAGAAGTATCGCGGCGGTGGAATGCCGGGTGCAGTGGATGTGGATCTGGGGCTTG
ATGACAGTGCGCTGGACACAGAATTTTCCATTGGTGGTACTGAACTGCTGCTGTTTAAACAGATGGGCAAAGCCACGGTG
GATGGCATCCAGTTGCGCTTCACCGGCTCTATCCAGCGTGACGATACCGGAGAAGTGCAGGCCGTGGAGCTTGTGGTGCG
TGGACGTCACAAAGAAGTGGATTCCGGCGAGTGGAAGACGGGCGAAAGCAACACCACCAAAGTGACCAGTACCAACAGCT
ACGCGAAGCTGACTATCAATGGTGAGGTGCTCTATGAAGTGGACCTTATCAACATGGTGGAAATTGTGGACGGTGTGGAC
CTGATGGAAGCGCACCGCAACGCCCTCGGCCTCTGA

Protein sequence :
MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMPGAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATV
DGIQLRFTGSIQRDDTGEVQAVELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
LMEAHRNALGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4606 NP_458689.1 probable major tail tube protein Not tested SPI-7 Protein 3e-74 95
t4300 NP_807897.1 major tail tube protein Not tested SPI-7 Protein 3e-74 95
unnamed ABR13485.1 phage tail tube protein Not tested PAGI-6 Protein 4e-39 54