Gene Information

Name : EcHS_A0938 (EcHS_A0938)
Accession : YP_001457675.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Unknown
Product : baseplate assembly protein J
Function : -
COG functional category : R : General function prediction only
COG ID : COG3948
EC number : -
Position : 937278 - 938186 bp
Length : 909 bp
Strand : +
Note : identified by similarity to SP:P51767; match to protein family HMM PF04865

DNA sequence :
ATGGCAGTGATTGACCTTTCGCAGTTGCCTGCACCGCAGATTGTGGATGTGCCGGACTTTGAGACGCTGCTTGCCGAACG
CAAGGCAGAATTTGTGGCGCTTCATCCGAAAGATGAGCAGGAAGCCATGATCCGCACGCTGGAACTGGAATCTGAACCCG
TCACTAAATTGTTGCAGGAGAACGCTTACCGTGAGTTGCTTCTGCGCCAGCGCATTAACGAAGCCGCGCAGGCGGTGATG
GTGGCTTACGCGATGGGCGGCGATCTTGACCAGCTCGCTGCCAACTACAACGTGACACGCCTGACGGTGACGCCTGCTGA
TAATGATGCTGTGCCGCCCGTTGCAGCTGTGATGGAAAGCGATGAAGCGTTACGCCTGCGTGTGCCTGCAGCCTTTGAAG
GGCTTTCTGTTGCGGGGCCAACTGCAGCTTATGAATTTCATGCCCGAAGCGCCGACGGTCGGGTGGCGGATGCCAGTGCA
ACCAGCCCGGCACCTGCAGAGGTGGTGCTGACTGTCCTTAGCCGCGAAGGCGATGGAACTGCAGAAAAAGACCTGCTGGA
CGTGGTGGAAAAAGCTCTGAACAGTGAGAACGTCCGCCCGGTGGCTGACCGTCTGACGGTTCGCAGCGCAGAAATCATCC
CGTATCGCGTGGAAGCCACCATTTTTCTCTATCCGGGACCGGAAGCAGAGCCGGTAATGGCAGCGGCAAAAGCCAGCCTG
CAGAAGTACATCGCCAGTCAGACGCGTCTTGGTCGGGATATTCGCCGTAGCGCCATCTTTGCCGCCCTGCATGTTGAGGG
TGTGCAGCGTGTGGAGCTGGCTTCTCCTCTGGCGGATGTGGTCCTGAACAAAACACAGGCGGCATCATGTACGCAGTGGA
GCGTAACCAACGGAGGAACGGATGAATAG

Protein sequence :
MAVIDLSQLPAPQIVDVPDFETLLAERKAEFVALHPKDEQEAMIRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVM
VAYAMGGDLDQLAANYNVTRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASA
TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL
QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADVVLNKTQAASCTQWSVTNGGTDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4613 NP_458695.1 probable phage baseplate assembly protein Not tested SPI-7 Protein 9e-120 93
t4307 NP_807903.1 phage baseplate assembly protein Not tested SPI-7 Protein 9e-120 93
unnamed ABR13480.1 predicted baseplate or tail fiber base Not tested PAGI-6 Protein 8e-59 56