Gene Information

Name : EcHS_A0606 (EcHS_A0606)
Accession : YP_001457373.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Virulence
Product : chaperone protein FimC-like protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 618505 - 619197 bp
Length : 693 bp
Strand : +
Note : identified by match to protein family HMM PF00345; match to protein family HMM PF02753

DNA sequence : 
ATGATGACTAAAATAAAGTTATTGATGCTCATTATATTTTATTTAATCATTTCGGCCAGCGCCCATGCTGCCGGAGGGAT
CGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATG
AGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTT
GTTAGTGAACCCAAAAGCGAAAATACCTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTT
CTGGATGAATGTTAAGACGATCCCTTCGGTAGATAAAAATGCATTGAACGGCAGGAATGTTTTGCAACTGGCGATTTTAT
CGCGCATGAAATTATTTCTCCGTCTAATTCAATTACAAGAATTACCCGCAGAAGCACCGGACACACTCAAGTTTTCGCGA
TCCGGTAACTATATCAATGTTCATAATCCCTCACCTTTTTATGTCACTCTGGTTAACTTACAAGTGGGCAACCAAAAGTT
GGGGAATGCTATGGCTGCACCCAGAGTTAATTCACAAATTCCCTTACCCTCAGGAGTGCAGGGAAAGCTGAAATTTCAGA
CCGTTAATGATTATGGTTCAGTAACCCCGGTCAGAGAAGTGAACTTAAACTAA

Protein sequence : 
MMTKIKLLMLIIFYLIISASAHAAGGIALGATRIIYPADAKQTAVWIRNSHTNERFLVNSWIENSSGVKEKSFIITPPLF
VSEPKSENTLRIIYTGPPLAADRESLFWMNVKTIPSVDKNALNGRNVLQLAILSRMKLFLRLIQLQELPAEAPDTLKFSR
SGNYINVHNPSPFYVTLVNLQVGNQKLGNAMAAPRVNSQIPLPSGVQGKLKFQTVNDYGSVTPVREVNLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 6e-42 46
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 3e-37 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcHS_A0606 YP_001457373.1 chaperone protein FimC-like protein VFG0445 Protein 6e-64 64
EcHS_A0606 YP_001457373.1 chaperone protein FimC-like protein VFG0875 Protein 4e-43 48
EcHS_A0606 YP_001457373.1 chaperone protein FimC-like protein VFG1644 Protein 1e-37 45
EcHS_A0606 YP_001457373.1 chaperone protein FimC-like protein VFG0911 Protein 3e-37 45