Gene Information

Name : EcHS_A0343 (EcHS_A0343)
Accession : YP_001457114.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 354971 - 355354 bp
Length : 384 bp
Strand : -
Note : identified by similarity to GB:CAG75764.1

DNA sequence :
ATGTACGCAAAATCTTTTCTCGCACTTGATGGCAACGGACGTCTGACCGGTGCCCGTACCGCACAGACTGCACCTTACGA
TAGCTACACCTGCCACCTTTGCGGCAGTGCACTCAGATACCACCCGCAATACGATACCGAACGTCCCTGGTTTGAACACG
CTGACGAAGGGCTGACGGAGCACGGTCATGAGTGCCCTTATGTCAGGCCGGAACGCAGAGAAATACGGTTGATTAAACGT
CTGCAGCAATTCGTCCCGGATGCCTTACCCGTAGTACGTAAAGCCAGCTGGCACTGCAGGCAATGTCACCACGATTATTA
TGGGGAGCAGTACTGCACACACTGCCAGACCGGGCGCTTCAGTGAGGAGGGGGGAGCAGAATGA

Protein sequence :
MYAKSFLALDGNGRLTGARTAQTAPYDSYTCHLCGSALRYHPQYDTERPWFEHADEGLTEHGHECPYVRPERREIRLIKR
LQQFVPDALPVVRKASWHCRQCHHDYYGEQYCTHCQTGRFSEEGGAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SF2981 NP_708755.1 hypothetical protein Not tested SHI-1 Protein 1e-56 99
unnamed AAK00467.1 unknown Not tested SHI-1 Protein 8e-57 99
S3186 NP_838469.1 hypothetical protein Not tested SHI-1 Protein 1e-56 99
unnamed ADD91715.1 hypothetical protein Not tested PAI-I AL862 Protein 1e-52 95
unnamed CAI43833.1 hypothetical protein Not tested LEE Protein 2e-52 94
aec60 AAW51743.1 Aec60 Not tested AGI-3 Protein 9e-55 93
ECO103_3572 YP_003223433.1 hypothetical protein Not tested LEE Protein 1e-53 92
APECO1_1083 YP_853103.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-50 90
unnamed CAE85181.1 hypothetical protein Not tested PAI V 536 Protein 2e-49 89

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
EcHS_A0343 YP_001457114.1 hypothetical protein VFG0645 Protein 3e-57 99