|
Name : EcHS_A3142 (EcHS_A3142) Accession : YP_001459760.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0810 EC number : - Position : 3151413 - 3155924 bp Length : 4512 bp Strand : - Note : identified by similarity to GB:BAC62719.1 DNA sequence : TTGAGCGCAACCCTGTTAGCCGGTTGTGATGGCGGTGGTTCCGGATCTTCCTCCGATACGCCGCCTGTAGATTCTGGAAC AGGATCTTTGCCGGAAGTGAAACCTGATCCAACACCAAACCCGGAGCCGACGCCTGAGCCAACGCCGGACCCAGAGCCTA CGCCAGAACCGATACCTGATCCTGAACCAACACCAGAACCGGAGCCAGAACCTGTTCCTACGAAAACGGGTTATCTGACC CTGGGCGGAAGCCAGCGGGTAACTGGTGCTACCTGTAATGGTGAATCCAGCGATGGCTTTACATTTAAACCTGGCGAGGA CGTTACTTGCGTGGCGGGTAACACGACAATTGCCACCTTCAACACTCAGTCAGAAGCTGCGCGTAGCTTGCGTGCGGTTG AAAAAGTGTCGTTTAGCCTTGAGGACGCGCAAGAACTGGCGGGCTCCGATGACAAGAAAAGCAATGCGGTTTCGCTGGTA ACGTCCAGTAACAGCTGTCCGGCGAATACAGAACAGGTTTGTCTGACGTTCTCCTCGGTGATCGAGAGTAAACGCTTCGA CTCGCTGTATAAGCAAATCGATCTGGCACCGGAAGAGTTCAAAAAGCTGGTCAATGAAGAGGTGGAAAACAATGCTGCGA CCGATAAAGCGCCATCCACTCATACTTCACCGGTCGTGCCCGTCACCACGCCGGGAACAAAACCGGATCTGAACGCTTCC TTCGTGTCGGCTAACGCGGAACAGTTTTATCAGTATCAACCCACTGAAATCATTCTCTCTGAAGGTCGACTGGTCGATAG CCAGGGATATGGTGTTGCTGGCGTCAACTACTACACCAATTCAGGCCGTGGCGTGACAGGGGAAAATGGTGAATTTTCCT TTAGCTGGGGCGAAACCATCTCCTTTGGTATCGATACCTTTGAACTGGGTTCAGTGCGCGGCAATAAGTCGACCATTGCG CTGACTGAACTGGGTGATGAAGTTCGCGGGGCGAATATTGATCAGCTTATTCATCGCTATTCGACGACCGGGCAAAATAA TACCCGTGTTGTTCCGGACGATGTACGCAAGGTCTTTGCCGAATATCCCAACGTGATCAACGAGATTATCAATCTCTCGT TATCCAACGGTGCGACGCTGGGGGAAGGTGAGCAAGTCGTTAATCTGCCTAACGAATTTATTGAGCAGTTTAATACGGGT CAGGCCAAAGAGATCGATACCGCGATTTGTGCGAAAACCGATGGTTGTAACGAGGCTCGCTGGTTCTCGCTGACGACGCG CAATGTTAATGACGGCCAGATTCAGGGCGTTATCAACAAGCTGTGGGGCGTGGATACGAACTACAAATCTGTCAGCAAGT TCCATGTATTCCATGACTCCACCAACTTCTATGGCAGCACGGGTAATGCGCGCGGTCAGGCGGTGGTGAATATCTCCAAC GCGGCCTTCCCGATTCTGATGGCGCGTAATGATAAAAACTACTGGCTGGCCTTCGGCGAGAAACGGGCCTGGGATAAAAA TGAGCTGGCGTACATTACTGAAGCGCCTTCCATTGTGCGACCAGAGAACGTGACACGCGAAACCGCCACCTTCAACCTGC CGTTTATTTCGCTGGGGCAAGTGGGCGATGGCAAGCTGATGGTTATCGGTAACCCACACTACAACAGCATCCTGCGTTGC CCGAACGGTTACAGCTGGAACGGGGGCGTTAATAAAGATGGGCAGTGTACGCTCAACAGCGACCCGGATGACATGAAGAA CTTCATGGAGAACGTGCTGCGCTATCTGTCAAATGATCGCTGGTTGCCGGATGCAAAATCCAATATGACCGTGGGTACTA ACCTGGACACGGTGTATTTCAAAAAACACGGGCAGGTTACAGGAAATAGTGCTGCGTTCGGCTTTCATCCGGATTTTGCG GGTATCTCTGTTGAGCATTTAAGTAGCTATGGCGATCTCGACCCGCAGGAAATGCCGCTGCTGATCCTCAACGGCTTTGA GTATGTGACTCAGGTTGGTAACGATCCTTATGCAATCCCGCTGCGTGCAGATACCAGCAAACCGAAGCTGACCCAGCAGG ATGTGACCGATTTGATCGCCTATATGAACAAAGGTGGATCGGTGCTGATCATGGAAAACGTGATGAGCAATCTTAAGGAA GAGAGCGCATCTGGCTTTGTACGTCTGCTTGATGCCGCAGGTTTGTCGATGGCGCTTAACAAGTCGGTAGTAAATAACGA TCCGCAAGGCTACCCGGACCGCGTTCGTCAACGACGTTCAACGCCAATTTGGGTCTATGAGCGTTATCCGGCTGTCGATG GTAAACCACCGTATACCATTGATGACACCACGAAAGAAGTTATCTGGAAATATCAGCAAGAAAACAAACCTGATGACAAA CCGAAGCTGGAAGTTGCCAGCTGGCAGGAAGAAGTTGAGGGTAAACAGGTAACTCAATTCGCCTTTATCGATGAAGCCGA CCACAAAACGCCTGAGTCACTGGCTGCGGCGAAGAAGAGAATTCTGGACGCGTTCCCAGGGCTGGAAGAGTGTAAGGATT CTGACTACCACTATGAGGTCAACTGTCTGGAATATCGTCCTGGCACGGGGGTTCCGGTTACTGGTGGCATGTATGTTCCA CAGTATACGCAACTAAGCCTTAACGCCGACACTGCGAAAGCGATGGTGCAGGCTGCGGATTTAGGCACCAACATTCAGCG TCTGTATCAGCATGAGCTTTACTTCCGTACCAATGGTCGCAAAGGTGAGCGTCTGAGCAGCGTCGATCTGGAACGTCTGT ACCAGAACATGTCGGTCTGGCTGTGGAATAAAATTGAATATCGCTATGAAAACGACAAGGATGACGAGCTGGGCTTTAAA ACGTTCACCGAGTTCCTGAACTGTTACGCCAACAATGCTTATGATGGTGGCACGCAGTGCTCCGCAGAGCTGAAACAATC GCTGATCGATAACAAGATGATCTACGGTGAAGGCAGCAAAGCGGGCATGATGAACCCGAGCTACCCGCTTAACTATATGG AAAAACCGCTGACGCGCCTGATGCTGGGGCGTTCCTGGTGGGATCTGAACATCAAGGTTGATGTCGAGAAGTATCCGGGG GCGGTATCGGCTGAAGGTGAGGAGGTTACTGAAACCATCAACCTGTACTCGAATCCGACCAAATGGTTTGCGGGTAACAT GCAGTCTACTGGCCTGTGGGCTCCGGCTCAGCAGGAAGTCAGCATTAAGTCCAATGCGAAAGTCCCTGTGACTGTTACCG TGGCGCTGGCTGACGACCTGACCGGGCGTGAGAAGCATGAGGTTGCGCTGAACCGTCCGCCAAGAGTGACTAAAACATAC TCTCTGGATGCTAGCGGCACGGTGAAGTTCAAGGTTCCTTACGGTGGTCTGATTTATATCAAGAGCGACAGTAAAGAGGA GAAATCAGCCAACTTCACCTTTACTGGCGTGGTAAAAGCGCCGTTCTATAAAGACGGTAAATGGAAAAACGACCTGAAAT CCCCTGCGCCGTTGGGTGAGCTGGAGTCTGCGTCGTTCGTCTATACCACGCCGAAGAAGAACCTTGAGGCCAGCAATTAC AAGGGCGGTCTGAAACAATTCGCTGAGGATCTGGATACCTTTGCCAGCTCGATGAATGACTTCTACGGTCGTGATGGCGA AAGCGGTAAGCACCGGATGTTTACCTATGAAGCATTGACGGGGCACAAACATCGTTTCACCAACGATGTGCAGATCTCCA TCGGTGATGCGCACTCTGGTTATCCGGTGATGAACAGCAGCTTCTCGCCGAACAGCACCACGCTGCCGACGACGCCGCTG AACGACTGGCTGATCTGGCACGAAGTAGGGCACAACGCTGCAGAAACGCCGCTGACTGTACCGGGCGCAACTGAAGTGGC GAACAACGTGCTGGCGCTGTACATGCAGGATCGTTATCTCGGCAAGATGAACCGTGTCGCTGACGATATTACCGTTGCGC CGGAATATCTGGAGGAGAGCAACGGTCAGGCATGGGCGCGTGGCGGTGCGGGTGACCGTCTGCTGATGTACGCGCAGCTG AAGGAATGGGCAGAGAAAAACTTTGATATCAAACAGTGGTATCCAGAAGGCTCTCTGCCAGCGTTCTACAGCGAGCGTGA AGGGATGAAAGGCTGGAACCTGTTCCAGTTGATGCACCGTAAAGCACGCGGCGATGATGTTGGCAATGACAAATTTGGCA ACAGAAACTACTGTGCCGAATCCAACGGTAACGCTGCCGACACGCTGATGCTGTGTGCATCCTGGGTCGCTCAGACGGAC CTTTCCGCATTCTTTAAGAAATGGAATCCGGGCGCGAATGCTTACCAGTTGCCGGGAGCGACAGAGATGAGCTTCGAGGG CGGTGTGAGCCAGTCGGCTTACAACACGCTCGCGTCACTCGATCTGCCGAAACCGAAGCAAGGGCCGGAAACCATTAACA AGGTTACCGAGTATTCGATGCCTGCTGAATAA Protein sequence : MSATLLAGCDGGGSGSSSDTPPVDSGTGSLPEVKPDPTPNPEPTPEPTPDPEPTPEPIPDPEPTPEPEPEPVPTKTGYLT LGGSQRVTGATCNGESSDGFTFKPGEDVTCVAGNTTIATFNTQSEAARSLRAVEKVSFSLEDAQELAGSDDKKSNAVSLV TSSNSCPANTEQVCLTFSSVIESKRFDSLYKQIDLAPEEFKKLVNEEVENNAATDKAPSTHTSPVVPVTTPGTKPDLNAS FVSANAEQFYQYQPTEIILSEGRLVDSQGYGVAGVNYYTNSGRGVTGENGEFSFSWGETISFGIDTFELGSVRGNKSTIA LTELGDEVRGANIDQLIHRYSTTGQNNTRVVPDDVRKVFAEYPNVINEIINLSLSNGATLGEGEQVVNLPNEFIEQFNTG QAKEIDTAICAKTDGCNEARWFSLTTRNVNDGQIQGVINKLWGVDTNYKSVSKFHVFHDSTNFYGSTGNARGQAVVNISN AAFPILMARNDKNYWLAFGEKRAWDKNELAYITEAPSIVRPENVTRETATFNLPFISLGQVGDGKLMVIGNPHYNSILRC PNGYSWNGGVNKDGQCTLNSDPDDMKNFMENVLRYLSNDRWLPDAKSNMTVGTNLDTVYFKKHGQVTGNSAAFGFHPDFA GISVEHLSSYGDLDPQEMPLLILNGFEYVTQVGNDPYAIPLRADTSKPKLTQQDVTDLIAYMNKGGSVLIMENVMSNLKE ESASGFVRLLDAAGLSMALNKSVVNNDPQGYPDRVRQRRSTPIWVYERYPAVDGKPPYTIDDTTKEVIWKYQQENKPDDK PKLEVASWQEEVEGKQVTQFAFIDEADHKTPESLAAAKKRILDAFPGLEECKDSDYHYEVNCLEYRPGTGVPVTGGMYVP QYTQLSLNADTAKAMVQAADLGTNIQRLYQHELYFRTNGRKGERLSSVDLERLYQNMSVWLWNKIEYRYENDKDDELGFK TFTEFLNCYANNAYDGGTQCSAELKQSLIDNKMIYGEGSKAGMMNPSYPLNYMEKPLTRLMLGRSWWDLNIKVDVEKYPG AVSAEGEEVTETINLYSNPTKWFAGNMQSTGLWAPAQQEVSIKSNAKVPVTVTVALADDLTGREKHEVALNRPPRVTKTY SLDASGTVKFKVPYGGLIYIKSDSKEEKSANFTFTGVVKAPFYKDGKWKNDLKSPAPLGELESASFVYTTPKKNLEASNY KGGLKQFAEDLDTFASSMNDFYGRDGESGKHRMFTYEALTGHKHRFTNDVQISIGDAHSGYPVMNSSFSPNSTTLPTTPL NDWLIWHEVGHNAAETPLTVPGATEVANNVLALYMQDRYLGKMNRVADDITVAPEYLEESNGQAWARGGAGDRLLMYAQL KEWAEKNFDIKQWYPEGSLPAFYSEREGMKGWNLFQLMHRKARGDDVGNDKFGNRNYCAESNGNAADTLMLCASWVAQTD LSAFFKKWNPGANAYQLPGATEMSFEGGVSQSAYNTLASLDLPKPKQGPETINKVTEYSMPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAE85238.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 0.0 | 90 |
| VC0395_A0370 | YP_001216326.1 | lipoprotein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| VC0845 | NP_230493.1 | hypothetical protein | Not tested | VPI-1 | Protein | 0.0 | 49 |
| acfD | AAK20802.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75667.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 49 |
| acfD | ACK75646.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75664.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75670.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75649.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75655.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75652.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75661.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| acfD | ACK75658.1 | accessory colonization factor AcfD | Virulence | VPI | Protein | 0.0 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcHS_A3142 | YP_001459760.1 | hypothetical protein | VFG0106 | Protein | 0.0 | 49 |
