Name : gspH2 (EcHS_A3134) Accession : YP_001459752.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Virulence Product : general secretion pathway protein H Function : - COG functional category : N : Cell motility COG ID : COG2165 EC number : - Position : 3143166 - 3143729 bp Length : 564 bp Strand : - Note : identified by match to protein family HMM PF07963; match to protein family HMM TIGR01708; match to protein family HMM TIGR02532 DNA sequence : GTGCCTGAACGCGGATTCACACTTCTGGAAATCATGCTGGTGATTTTCCTTATCGGCCTTGCCAGTGCGGGCGTGGTACA GACTTTTGCGACCGATTCTGAATCGCCCGCGAAAAAAGCGGCGCAGGATTTTCTGACTCGCTTTGCGCAGTTTAAGGACA GGGCAGTGATCGAAGGACAAACACTCGGTGTGTTAATCGACCCGCCTGGCTACCAGTTTATGCAGCGTCGTCAGGGGCAG TGGTTGCCCGTTTCTGCGACCCGGTTATCAGCACAGGTTACGGTGCCGAAACAGGTGCAGATGCTGTTACAACCCGGAAG TGATATCTGGCAGAAGGAATATGCGCTGGAGCTGCAACGTCGTCGCCTGACGCTGCACGATATTGAACTGGAGCTGCAAA AAGAGGCGAAAAAGAAGACGCCGCAGATCCGTTTTTCGCCTTTTGAACCCGCCACGCCGTTTACGCTGCGCTTCTACTCG GCGGCGCAAAACGCATGTTGGGCGGTAAAACTGGCGCACGATGGCGCGTTATCCCTCAATCAATGTGATGAGAGGATGCC ATGA Protein sequence : MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSESPAKKAAQDFLTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQ WLPVSATRLSAQVTVPKQVQMLLQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS AAQNACWAVKLAHDGALSLNQCDERMP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspH | CAE85230.1 | GspH, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-80 | 100 |
gspH | YP_854403.1 | type II secretion protein GspH | Not tested | PAI I APEC-O1 | Protein | 1e-84 | 99 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
gspH2 | YP_001459752.1 | general secretion pathway protein H | VFG2051 | Protein | 6e-79 | 98 |