Gene Information

Name : gspI2 (EcHS_A3133)
Accession : YP_001459751.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Virulence
Product : general secretion pathway protein I
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3142798 - 3143169 bp
Length : 372 bp
Strand : -
Note : identified by match to protein family HMM PF02501; match to protein family HMM PF07963; match to protein family HMM TIGR01707; match to protein family HMM TIGR02532

DNA sequence : 
ATGAAGCGCGGATTTACCTTGCTGGAAGTGATGCTCGCGCTGGCGATTTTTGCGCTGGCTGCCACGGCGGTGTTACAGAT
TGCCAGCGGTGCGCTGAGTAATCAGCAAATTCTTGAGGAAAAAACGGTAGCGGGCTGGGTGGCTGAAAACCAGACCGCGC
TGCTCTACCTGATGACCCGCGAGCAGCGGGCGGTCAGGCAGCAGGGCGAGAGCGATATGGCAGGAAGCCGCTGGTACTGG
CGAACCACACCGCTGAGTACAGGCAACGCGCTGCTCCAGGCGGTGGATATTGAAGTCAGCCTTCACGAAGACTTTTCGCC
GGTGATTCAGTCACGACGCGCCTGGTTTAGCGCCGTGGGAGGCCAACAGTGA

Protein sequence : 
MKRGFTLLEVMLALAIFALAATAVLQIASGALSNQQILEEKTVAGWVAENQTALLYLMTREQRAVRQQGESDMAGSRWYW
RTTPLSTGNALLQAVDIEVSLHEDFSPVIQSRRAWFSAVGGQQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspI CAE85229.1 GspI, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-41 97
gspI YP_854402.1 type II secretion protein GspI Not tested PAI I APEC-O1 Protein 2e-41 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspI2 YP_001459751.1 general secretion pathway protein I VFG2052 Protein 1e-41 93