Gene Information

Name : gspL2 (EcHS_A3130)
Accession : YP_001459748.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Virulence
Product : GspL-like protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3297
EC number : -
Position : 3140047 - 3141225 bp
Length : 1179 bp
Strand : -
Note : similar to general secretory pathway protein L

DNA sequence :
GTGAGTTCCATCCTTGAGATTTTTTTCCCGCTTTGCGCCGCTGAGCCCATCCATTGGCAGCGCCGTACACCCGATGTGGA
GCACGGTATCTGGTCTGACGTTGCTAACGAACAGCTCCAGCAATGGCTGCAAACTGATGCGATTCGACTCTACATTCCCG
GCGAATGGATCAGCGTCTGGCAGGTTGAACTGCCTGATGTCGCCCGCAAGCAGATACCGACTATTCTGCCCGCCTTACTG
GAAGAAGAACTGAACCAGGATATCGATGAACTGCATTTCGCCCCGTTGAAAATCAATCAGCAACTGGCAACCGTAGCCGT
GATTCACCAACAGCATATGCGCAACATTGCGCAGTGGTTGCAGGAAAACGGCATCACCCGCGCTACCGTCGCGCCGGACT
GGATGTCCATTCCTTGTGGGTTTATGGCTGGCGATGCACAACGGGTTATCTGCCGCATCGATGAATGCCGGGGATGGAGC
GCCGGGCGGGCGCTGGCTCCGGTCATGTTCCGCGCCCAGCTCAATGAGCAGAATTTACCGCTTTCGCTAACCGTAGTCGG
CATTGCACCGGAAAAGCTATCAGCATGGGCTGGCGCAGACGCTGAACGCCTGACCGTTACAGCTCTGCCCGCCATTACCA
CTTATGGCGAACCGGAAGGGAACCTGCTGACAGGGCCGTGGCAGCCTCGCGTCAGCTACCGAAAACAGTGGGCGCGCTGG
CGGGTGATGATTCTGCCGATATTGCTGATTCTGGTTGCGCTGGCAGTGGAGCGGGGCGTGACGTTATGGAGCGTCAGCGA
ACAGGTGGCGCAAAGCCGCACCCAGGCGGAGGAACAGTTCTTAACGTTGTTCCCGGAGCAGAAGCGGATTGTGAATTTAC
GCTCTCAGGTGACGATGGCGCTGAAAAAATATCGCCCACAGGCCGACGATACCCGGCTGCTCGCCGAGTTGTCAGCGATC
GCCAGCACCCTGAAATCAGCGTCACTTTCCGACATCGAAATGCGTGGTTTCACCTTTGATCAAAAACGCCAGATACTTCA
CCTCCAGCTACGGGCCGCGAACTTTGCCAGTTTCGACAAACTGCGTAGTGCACTGGCAACCGATTATGTTGTGCAACAGG
ACGCGTTACAGAAAGAGGGTGATGCGGTTTCCGGCGGCGTAAAGTTGCGGAGGAAATAA

Protein sequence :
MSSILEIFFPLCAAEPIHWQRRTPDVEHGIWSDVANEQLQQWLQTDAIRLYIPGEWISVWQVELPDVARKQIPTILPALL
EEELNQDIDELHFAPLKINQQLATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGFMAGDAQRVICRIDECRGWS
AGRALAPVMFRAQLNEQNLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAITTYGEPEGNLLTGPWQPRVSYRKQWARW
RVMILPILLILVALAVERGVTLWSVSEQVAQSRTQAEEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAI
ASTLKSASLSDIEMRGFTFDQKRQILHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVKLRRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspL YP_854399.2 GspL-like protein Not tested PAI I APEC-O1 Protein 2e-119 97
gspL CAE85226.1 GspL, hypotehtical type II secretion protein Not tested PAI V 536 Protein 9e-164 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
gspL2 YP_001459748.1 GspL-like protein VFG2055 Protein 3e-119 97