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Name : gspM (EcHS_A3129) Accession : YP_001459747.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Virulence Product : general secretion pathway protein YghD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3149 EC number : - Position : 3139509 - 3140045 bp Length : 537 bp Strand : - Note : identified by similarity to SP:P41851; match to protein family HMM PF04612 DNA sequence : ATGTTACGCGATAAATTTATTCACTATTTTCAGCAATGGCGTGAACGCCAGTTAAGCCGTGGCGAACACTGGCTGGCACA ACACCTGGCGGGGCGTTCTCCGCGTGAAAAGGGCATGTTACTGGCAGCGGTGGTGTTCCTGTTTAGCGTCGGATATTACG TCCTCATCTGGCAGCCGTTGAGCGAACGGATAGAACAACAGGAGACAATGTTGCAGCAACTGGTGGCGATGAACACCAGA CTGAGGAGCGCCGCGCCGGATATTATTGCGGCGCGAAAATCCGCCACAACAACGCCTGCGCAGGTATCGCGGGTTATCAG TGACAGTGCTTCCGCGCACTCGGTAGTCATCAAGCGGATAGCCGAGCGTGGGGAGAATATTCAGGTCTGGATAGATCCGG TGGTGTTTAATGACCTGCTGAACTGGTTAAACGCGCTGGATGAAAAGTATGCGCTGCGGGTGACACAAATTGATGCCAGT GCTGCTGAGAAGCCTGGGATGGTGAATGTGCAGCGGCTGGAGTTTGGACGGGGGTAA Protein sequence : MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAVVFLFSVGYYVLIWQPLSERIEQQETMLQQLVAMNTR LRSAAPDIIAARKSATTTPAQVSRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS AAEKPGMVNVQRLEFGRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| yghD | CAI43907.1 | putative secretion pathway protein | Not tested | LEE | Protein | 3e-79 | 98 |
| gspM | CAE85225.1 | GspM, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-78 | 97 |
| gspM | YP_854398.1 | general secretion pathway protein YghD | Not tested | PAI I APEC-O1 | Protein | 7e-78 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| gspM | YP_001459747.1 | general secretion pathway protein YghD | VFG2056 | Protein | 5e-57 | 94 |
