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Name : rdgB (EcHS_A3114) Accession : YP_001459733.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Unknown Product : deoxyribonucleotide triphosphate pyrophosphatase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0127 EC number : - Position : 3125599 - 3126192 bp Length : 594 bp Strand : + Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine DNA sequence : ATGCAAAAAGTTGTCCTCGCAACCGGCAATGCCGGTAAAGTGCGTGAGCTGGCGTCGCTGCTTAGCGACTTCGGTCTTGA TATCGTGGCCCAAACAGACCTCGGCGTAGATTCCGCTGAAGAAACCGGCCTGACCTTTATCGAAAACGCGATTCTGAAAG CGCGCCATGCGGCAAAAGTGACCGGTTTACCGGCAATTGCCGACGACTCTGGTCTGGCGGTAGATGCGCTGGGTGGCGCG CCGGGTATTTACTCCGCGCGTTATTCCGGTGAAGACGCGACCGATCAAAAGAATCTGCAAAAACTGTTGGAAACACTGAA AGACGTACCGGACGACCAACGTCAGGCGCGTTTCCACTGCGTGCTGGTATATCTGCGTCACGCGGAAGATCCGACTCCGC TGGTGTGCCACGGTAGCTGGCCGGGCGTGATTACTCGTGAACCAGCGGGCACTGGTGGCTTTGGTTATGATCCAATCTTC TTCGTACCTTCCGAAGGGAAAACCGCTGCCGAACTGACCCGCGAAGAAAAGAGCGCCATTTCCCACCGTGGTCAGGCATT GAAACTGCTGTTGGACGCTTTACGTAATGGTTAA Protein sequence : MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGLTFIENAILKARHAAKVTGLPAIADDSGLAVDALGGA PGIYSARYSGEDATDQKNLQKLLETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1465 | YP_001800859.1 | deoxyribonucleotide triphosphate pyrophosphatase | Not tested | Not named | Protein | 5e-27 | 45 |
