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Name : gabD (EcHS_A2796) Accession : YP_001459429.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase I Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 2808717 - 2810165 bp Length : 1449 bp Strand : + Note : catalyzes the formation of succinate from succinate semialdehyde; NADP dependent DNA sequence : ATGAAACTTAACGACAGTAAATTATTCCGCCAGCAGGCGTTGATTAACGGGGAATGGCTGGACGCCAACAATGGCGAGGT CATCGATGTCACCAATCCGGCGAACGGCGACAAGCTGGGTAGCGTACCCAAAATGGGCGCTGATGAAACCCGCGCCGCTA TCGACGCCGCCAACCGCGCTCTGCCCGCCTGGCGTGCGCTCACCGCCAAAGAACGCGCCAACATTCTGCGCAACTGGTTC AATTTGTTGATGGAGCATCAGGACGATTTAGCGCGCCTGATGACCCTAGAACAGGGCAAACCGCTGGCTGAAGCGAAAGG CGAAATTAGCTACGCCGCCTCCTTTATTGAGTGGTTTGCTGAAGAAGGCAAACGCATTTATGGCGACACCATTCCTGGTC ATCAGGCCGATAAGCGCCTGATTGTTATCAAGCAGCCGATTGGCGTCACCGCAGCTATCACGCCGTGGAACTTCCCGGCG GCGATGATTACCCGCAAAGCCGGTCCGGCGCTGGCGGCAGGCTGCACCATGGTGCTGAAGCCTGCCAGTCAGACGCCGTT CTCTGCGCTGGCGCTGGCGGAGCTGGCGATTCGCGCGGGCATTCCGGCTGGGGTATTTAACGTGGTCACCGGTTCGGCGG GCGCGGTGGGTAACGAACTGACCAGCAACCCGCTGGTGCGCAAGCTGTCGTTTACCGGTTCGACCGAAATTGGCCGCCAG TTAATGGAACAGTGCGCGAAAGACATCAAAAAAGTGTCGCTGGAGCTGGGCGGCAACGCGCCGTTTATCGTCTTTGACGA TGCCGACCTCGACAAAGCCGTGGAAGGTGCGCTGTCCTCGAAATTCCGCAACGCCGGGCAAACCTGCGTCTGCGCCAACC GTTTATACGTGCAGGACGGCGTGTATGACCGCTTTGCCGAAAAATTGCAGCAGGCGGTGAGCAAATTGCACATCGGCGAC GGGCTGGAGAAAGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGC GCTGGAGAAAGGTGCGCGTGTGGTTTGCGGCGGTAAAGCGGATGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGG TGGACGTTCCAGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCCCCACTGTTCCGTTTTAAAGATGAA GCCGATGTGATTGCGCAAGCCAATGACACCGAGTTTGGCCTTGCCGCCTATTTCTACGCCCGTGATTTAAGCCGCGTCTT CCGCGTGGGCGAAGCGCTGGAGTACGGCATCGTCGGCATCAATACCGGCATCATTTCCAATGAAGTGGCCCCGTTCGGCG GCATTAAAGCCTCGGGTCTGGGTCGTGAAGGTTCGAAGTATGGCATCGAAGATTACTTAGAAATCAAATATATGTGCATC GGTCTTTAA Protein sequence : MKLNDSKLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERANILRNWF NLLMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPA AMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALSSKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGD GLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKADERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDE ADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI GL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 6e-157 | 66 |
