|
Name : EcHS_A2488 (EcHS_A2488) Accession : YP_001459143.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Virulence Product : periplasmic pilus chaperone family protein Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 2493205 - 2493957 bp Length : 753 bp Strand : - Note : identified by match to protein family HMM PF00345 DNA sequence : ATGTTTAATCTGACTAACACTGCAAAAATCGTTGTCCCGGCACTGGCGCTGCTGGCGACAGCGGTCAGTTTCTCCAGCCA CGCTTCGGTGACGCCCGACAGGACACGGCTGGTGTTTAACGAAAGCGACAAGTCCATCAGCGTCACGCTGCGCAACAACG ATCCCAAACTGCCTTATCTGGCGCAGAGCTGGATAGAGGATGCAAAGGGCAACAAAATCAGCTCGCCGCTTGCGGTGCTT CCGCCAGTGCAGCGCATCGATGCGATGATGAACGGCCAGGTGAAGGTGCAGGGGCTGCCGGATATCAACAAACTGCCGGC CGACCGCGAGAGCGTGTTCTATTTCAACGTGCGCGAAATTCCGCCGAAATCAAATAAACCGAACACACTGCAGATTGCGC TGCAGACGCGTATCAAACTGTTCTGGCGACCGAAGGCGCTGGAGAACACCAGCATGAAAAGTCCGTGGCAGCATAAGGTG ACGCTCATCCGTAACGGCCAGGACTTCACCGTCAATAACCCGACGCCGTACTACGTGATCATCAGCAACGCCAGCGCTAA AAAAGGCGGCAACCCGCCGGCGGGATTCACACCGCTGATGATGGAGCCGAAAACCTCCGCACCGCTGAATGCGAAGATGG ACAGCGTGCCGGTGCTGACCTACATCAACGACTACGGCGCGCGGATGCCGCTGTACTTCAAATGCACCGGCAACAACTGC CAGGTGGATGAAGAGCAGAGCCGCAAAGGCTGA Protein sequence : MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDKSISVTLRNNDPKLPYLAQSWIEDAKGNKISSPLAVL PPVQRIDAMMNGQVKVQGLPDINKLPADRESVFYFNVREIPPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPVLTYINDYGARMPLYFKCTGNNC QVDEEQSRKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 9e-49 | 44 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 3e-48 | 44 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 3e-48 | 44 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 3e-48 | 44 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 2e-48 | 44 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 3e-48 | 44 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 8e-43 | 43 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 3e-49 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| EcHS_A2488 | YP_001459143.1 | periplasmic pilus chaperone family protein | VFG1547 | Protein | 5e-49 | 44 |
| EcHS_A2488 | YP_001459143.1 | periplasmic pilus chaperone family protein | VFG0896 | Protein | 1e-48 | 44 |
| EcHS_A2488 | YP_001459143.1 | periplasmic pilus chaperone family protein | VFG0885 | Protein | 4e-43 | 43 |
