Gene Information

Name : EcHS_A2197 (EcHS_A2197)
Accession : YP_001458869.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Unknown
Product : IS1, transposase orfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3677
EC number : -
Position : 2178508 - 2178783 bp
Length : 276 bp
Strand : +
Note : identified by match to protein family HMM PF03811

DNA sequence :
GTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAAGGCGTGGTGCGTAACGGTAAAAGTACTGCCGGACA
TCAGCGCTATCTCTGCTCTCACTGCCGTAAAACATGGCAGCTACAGTTCACTTACACCGCTTCTCAACCCGGTACGCATC
AGAAAATCATTGATATGGCCATGAATGGCGTCGGATGTCGCGCCAGTGCACGCATTATGGGCGTTGGCCTCAACACGGTT
TTACGTCACTTAAAAAACTCAGGCCGCAGTCGGTAA

Protein sequence :
MASVSISCPSCSATEGVVRNGKSTAGHQRYLCSHCRKTWQLQFTYTASQPGTHQKIIDMAMNGVGCRASARIMGVGLNTV
LRHLKNSGRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
S4046 NP_839215.1 IS1 orfA Not tested SHI-2 Protein 2e-37 98
S4058 NP_839226.1 IS1 orfA Not tested SHI-2 Protein 2e-37 98
aec39 AAW51722.1 InsA Not tested AGI-3 Protein 3e-37 97
insA NP_709464.1 IS1 ORF1 Not tested SHI-2 Protein 3e-37 97
EC042_4114 YP_006098398.1 transposase Not tested Tn2411 Protein 3e-37 96
insA NP_458737.1 insertion element IS1 protein Not tested SPI-7 Protein 3e-37 96
InsA (Tn1) CAJ77071.1 Transposase Not tested AbaR1 Protein 2e-37 96
insA ADD91745.1 transposase Not tested PAI-I AL862 Protein 2e-37 96
insA AEZ06026.1 InsA Not tested AbaR24 Protein 2e-37 96
EC042_4086 YP_006098369.1 transposase Not tested Tn2411 Protein 3e-37 96