|
Name : EcHS_A2193 (EcHS_A2193) Accession : YP_001458865.1 Strain : Escherichia coli HS Genome accession: NC_009800 Putative virulence/resistance : Unknown Product : polysaccharide biosynthesis/export protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1596 EC number : - Position : 2175221 - 2176357 bp Length : 1137 bp Strand : - Note : identified by similarity to SP:Q48450; match to protein family HMM PF02563 DNA sequence : ATGAAGAAAAAAATTGTTAGATTTTCGGCATTAGCGTTGGCAATTGGGTTTTTATCGGGTTGTACCATTATCCCTGGTCA GGGATTAAACAGTCTGCGGAAAAACGTGGTTGAGCTACCGGACAGTGACTACGATCTGGATAAACTGGTTAATGTGTACC CTATGACTCCTGGGCTTATCGATCAACTTCGTCCAGAGACCGTTCTGGCGAGACCTAACCCACAATTAGATAATTTGCTC CGAAGCTATGAATATCGCATTGGTGTGGGCGATGTATTGATGGTTACGGTATGGGATCACCCGGAACTGACAACGCCAGC AGGTCAGTACCGTAGCGCCAGCGACACTGGTAACTGGGTTAACTCTGACGGTACCATTTTCTATCCATATATTGGTAAGG TGCAGGTGGCGGGCAAAACGCTTAGCCAGGTACGCCAGGATATAGCCAACCGATTGGCCACTTATATTGAAAGCCCACAG GTTGATGTTAGCGTTGCTGCGTTTCGTTCTCAAAAGGTTTACGTGACAGGCGAAGTGACAAAATCAGGCCAGCAACCTAT TACCAATATTCCTTTAACGGTTATGGATGCAATAAATGCCGCTGGTGGGCTGGCACCAGACGCAGATTGGCGTAATGTTG TGCTGACTCATAATGGTAAAGATACAAAAGTATCACTTTATGCATTAATGCAAAAAGGGGATTTAACACAAAATCATATG TTATATCCTGGAGATATTCTCTTTGTACCAAGGAATGACGATCTTAAAGTGTTTGTCATGGGAGAGGTTGGCAAGCAGAG CACATTGAAGATGGATCGTAGTGGAATGACATTAGCAGAGGCAATCGGGAATGCGGAAGGCATGTCTCAAGCGTACAGTG ATGCCACGGGAGTCTTCGTTATTCGCCAACTGAAAGGTGATAAACAAGGTAAAATTGCTAATATCTATCAGTTGAACGCG CAAGATGCCTCCGCGATGGTTCTTGGTACAGAATTTGAATTACAACCTTATGATATCGTCTATGTCACATCGGCTCCATT AGTACGTTGGAATCGTGTAATTTCCCAACTTGTACCTACCATTACTGGAGTACATGATATGACAGAAACTGTAAGATATA TTAGGACCTGGCCATAA Protein sequence : MKKKIVRFSALALAIGFLSGCTIIPGQGLNSLRKNVVELPDSDYDLDKLVNVYPMTPGLIDQLRPETVLARPNPQLDNLL RSYEYRIGVGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNSDGTIFYPYIGKVQVAGKTLSQVRQDIANRLATYIESPQ VDVSVAAFRSQKVYVTGEVTKSGQQPITNIPLTVMDAINAAGGLAPDADWRNVVLTHNGKDTKVSLYALMQKGDLTQNHM LYPGDILFVPRNDDLKVFVMGEVGKQSTLKMDRSGMTLAEAIGNAEGMSQAYSDATGVFVIRQLKGDKQGKIANIYQLNA QDASAMVLGTEFELQPYDIVYVTSAPLVRWNRVISQLVPTITGVHDMTETVRYIRTWP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf39 | AAO18064.1 | Orf39 | Not tested | TTSS locus | Protein | 5e-132 | 69 |
