Gene Information

Name : ugd (EcHS_A2178)
Accession : YP_001458850.1
Strain : Escherichia coli HS
Genome accession: NC_009800
Putative virulence/resistance : Virulence
Product : UDP-glucose 6-dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1004
EC number : 1.1.1.22
Position : 2156840 - 2158006 bp
Length : 1167 bp
Strand : -
Note : identified by similarity to SP:P76373; match to protein family HMM PF00984; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026

DNA sequence :
ATGAAAATTACTATTTCCGGTACAGGTTATGTTGGTTTATCGAACGGTGTCCTGATTGCGCAAAACCACGAAGTGGTTGC
TCTGGATATCGTACAGGCCAAAGTGGATATGCTTAACCAGAAGATCTCTCCGATTGTGGATAAAGAGATTCAGGAATATC
TGGCAGAAAAACCGTTAAATTTCCGTGCCACCACGGACAAGCACGACGCCTATCGTAATGCCGACTACGTGATCATTGCG
ACGCCGACCGATTACGATCCCAAAACCAACTACTTCAACACCTCTACAGTGGAAGCGGTTATTCGCGATGTCACAGAGAT
CAACCCGAACGCGGTGATGATCATTAAATCGACCATCCCGGTGGGGTTCACCCGCGACATCAAAGAACGTTTAGGGATTG
ATAATGTTATTTTCTCTCCTGAGTTCCTGCGTGAAGGCCGTGCGCTGTACGACAACCTGCACCCATCGCGCATTGTTATT
GGTGAGCGCTCTGCGCGTGCCGAGCGTTTCGCAGACCTGCTGAAAGAAGGCGCGATTAAGCAGGATATCCCGACCCTGTT
TACCGACTCCACTGAAGCGGAAGCGATCAAACTGTTCGCGAACACCTATCTGGCGCTGCGTGTTGCCTATTTCAATGAGC
TCGACAGCTATGCTGAAAGCCAGGGGCTGAACAGCAAGCAGATTATCGAAGGGGTATGCCTGGATCCGCGTATCGGCAAC
CACTACAACAACCCGTCCTTTGGCTATGGCGGCTACTGCCTGCCGAAAGATACCAAGCAGCTGCTGGCGAACTACGAATC
GGTCCCGAACAATATCATCGCGGCTATCGTGGATGCTAACCGTACCCGTAAAGACTTTATCGCGGATTCTATTCTCGCCC
GTAAGCCGAAAGTGGTGGGTGTGTATCGCCTGATCATGAAGAGTGGTTCGGACAACTTCCGTGCTTCTTCTATTCAGGGC
ATTATGAAGCGCATCAAGGCGAAAGGTATTCCGGTTATTATCTATGAACCGGTGATGCAGGAAGATGAGTTCTTTAACTC
CCGCGTCGTGCGCGACCTGGATACCTTCAAACAAGAGGCGGATGTGATCATCTCTAACCGTATGGCGGAAGAGCTGGCGG
ATGTGGCGGACAAGGTATACACCCGCGATCTGTTTGGTAACGATTAA

Protein sequence :
MKITISGTGYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADYVIIA
TPTDYDPKTNYFNTSTVEAVIRDVTEINPNAVMIIKSTIPVGFTRDIKERLGIDNVIFSPEFLREGRALYDNLHPSRIVI
GERSARAERFADLLKEGAIKQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQGLNSKQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLLANYESVPNNIIAAIVDANRTRKDFIADSILARKPKVVGVYRLIMKSGSDNFRASSIQG
IMKRIKAKGIPVIIYEPVMQEDEFFNSRVVRDLDTFKQEADVIISNRMAEELADVADKVYTRDLFGND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 2e-92 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ugd YP_001458850.1 UDP-glucose 6-dehydrogenase VFG0963 Protein 7e-102 54