Gene Information

Name : CKO_00976 (CKO_00976)
Accession : YP_001452559.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 974013 - 975224 bp
Length : 1212 bp
Strand : +
Note : KEGG: aci:ACIAD2291 0.0069 cydB; cytochrome d terminal oxidase polypeptide subunit II K00426; COG: NOG06795 non supervised orthologous group; Psort location: plasma membrane, score: 23

DNA sequence :
GTGACGTCTCTTGAGAGCGCGGAAACGCCGCAAAAACCATTGTCCTGCTGGCCGCTTGCGTTCAGCGCGGGGTTACTCGG
TGTCGGGCAAAACGGCCTGCTGGTCGCGATCCCTGTACTGGTGATTCAGACAAACCTGAGCCTGTCGATTTGGGCGGCTT
TGCTGATGCTTGGCTCAATGCTGTTCCTGCCGTCTTCCCCGTGGTGGGGAAAGCAAATTGCCCGTGTGGGCAGTAAGCCT
GTGGTGCTGTGGGCACTGGGGGGATACGGCGCAAGCTTTACTCTGCTTGGGCTGGGAAGCATGCTGATGGCGACCGGCGC
CGTAACAACAGCGGTGGGGCTGGGAATATTAATCATCGCGCGGATCGCCTACGGGCTTACCGTGTCGGCGATGGTGCCAG
CCTGTCAGGTCTGGGCATTGCAGAGAGCAGGGGAAGGGAATCGTATGGTCGCTCTGGCAACCATTAGCTCCGGCTTGAGC
TGCGGCAGACTATTCGGGCCGTTGTGCGCAGCGGCGATGCTGGCAATTCACCCTCTGGCGCCGATGGGGCTGCTGATGGC
AGCGCCACTGCTGGCGCTGGTGATGCTGCTGCGGTTGCCTGGCACGCCACCGCAGCCCGCAGCGGAGCGCAAGAGCGCCA
GCCTGAGGCTGGATTGCCTGCCTTATCTGCTTTGCGCGCTGTTATTAGCTGCGGCGGTGAGCATGATGCAGCTTGGTCTT
TCACCCGCCCTTACTCGCCAGTTCGCCACGGATACCGCCGCCATTAGCCATCAGGTGGCGTGGCTGTTGGGGCTGGCCGC
AGTCGCCGCGCTTATCGCACAGTTCGGGGTGCTCCGCCCGCAGCGCCTGACGCCGATGGCGCTGCTCTTGAGTGCCGGAG
CGCTGATGATTTGTGGCCTGGCGATAATGCTCGCCGAACAGCTATGGTTGTTTTACCTCGGCTGTGCGGTGCTGTCGTTT
GGGGCTGCTCTGGCAACACCCGCTTATCAGCTTTTACTGAATGATAAGCTGACAGACGGCGCAGGCGCGGGCTGGATCGC
GACCAGCCACACGCTTGGCTATGGGCTTTGTGCATTGCTGGTGCCGCTGGTGTCGAAAACCGGCGCCGCAGCGGCGCTGA
TTGTGGCGGCTTTTTTCGTCGCTGTGTTATTTACCGTGGTGTCTGGCTTTATCTGGCGCAGCCGCTACCGTTCACGTCAT
TCCGCGATTTAA

Protein sequence :
MTSLESAETPQKPLSCWPLAFSAGLLGVGQNGLLVAIPVLVIQTNLSLSIWAALLMLGSMLFLPSSPWWGKQIARVGSKP
VVLWALGGYGASFTLLGLGSMLMATGAVTTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMVALATISSGLS
CGRLFGPLCAAAMLAIHPLAPMGLLMAAPLLALVMLLRLPGTPPQPAAERKSASLRLDCLPYLLCALLLAAAVSMMQLGL
SPALTRQFATDTAAISHQVAWLLGLAAVAALIAQFGVLRPQRLTPMALLLSAGALMICGLAIMLAEQLWLFYLGCAVLSF
GAALATPAYQLLLNDKLTDGAGAGWIATSHTLGYGLCALLVPLVSKTGAAAALIVAAFFVAVLFTVVSGFIWRSRYRSRH
SAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
imm NP_839224.1 membrane transport protein Not tested SHI-2 Protein 7e-110 89
imm NP_709453.1 membrane transport protein Not tested SHI-2 Protein 7e-110 89
shiF AAD44744.1 ShiF Virulence SHI-2 Protein 5e-110 89
shiF YP_002414047.1 putative membrane transport protein, major facilitator superfamily Not tested Not named Protein 2e-109 88
unnamed AAD54670.1 unknown Not tested SHI-2 Protein 3e-109 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00976 YP_001452559.1 hypothetical protein VFG0614 Protein 3e-110 89