Gene Information

Name : CKO_00972 (CKO_00972)
Accession : YP_001452555.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1670
EC number : -
Position : 971208 - 972155 bp
Length : 948 bp
Strand : -
Note : KEGG: sbo:SBO_4338 2.2e-166 iucB; siderophore biosynthesis protein K03896; COG: COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGTCTAAGGCAAACATCGTTCACAGCGGATATGGACTGCGCTGTGAAAAACTCGACAAGCCTCTGAATCTTAGCTGGGG
GCTGGACAATAGCGCGGTGCTGCGCTGGCCGGGGCCGCTGCCGACAGGGTGGCTGCGCGACGCGCTGGATCAGATATTTA
TCGCCGCACCGCAACTTTCAGCGGTGGTTCTCCCCTGGGCCGAATGGCGCGAGGAGCCACAGGCGCTGACGCTTTTCGGG
CAGGTAAAAAGCGACATCATCCATCGCGCCGCCTTCTGGCAGTTACCGCTATGGCTGAGTTCTCCGGCAAACTGGGCCTC
CGGCGAAATGTTTTTTGATGCAGAGCGTGAGATTTATTTCCCGCTGCGCCCGCCCCGTCCGCAGGGCGAGGTTTATCGCC
GTTACGATCCACGCGTTCGCAAGACGCTGAGTTTCCGCGTTGCCGATCCCGTTCTTGATGCAGAACGTTTCACCCGCTGG
ATGAACGATCCGCGCGTTGAGTATTTCTGGGAGCAAAGCGGCTCGCTGGAGGTACAGACCGCCTATCTGGAGCGCCAACT
CACCAGTAAACATGCGTTCCCGCTGATCGGCTGCTTCGACGATCGGCCGTTTAGCTATTTCGAAATCTACTGGGCGGCGG
AAGACCGCATTGGCCGCCACTATTCGTGGCAACCCTTTGACCGTGGCCTGCATCTGCTGGTTGGTGAACAGCAATGGCGC
GGAGCCCACTACGTGCAAAGCTGGCTGCGCGGGCTGACGCATTACCTGCTGCTGGATGAGCCCCGCACGCAGCGCACCGT
ACTTGAGCCACGCGCCGATAACCAGCGCCTGTTCCGCCACCTTGAGCCTGCGGGATACCGGACAATTAAAGAGTTCGACT
TCCCACACAAGCGCTCGCGCATGGTGATGGCGGATCGCCATCACTTCTTCACGGAGGTCGGTCTGTAA

Protein sequence :
MSKANIVHSGYGLRCEKLDKPLNLSWGLDNSAVLRWPGPLPTGWLRDALDQIFIAAPQLSAVVLPWAEWREEPQALTLFG
QVKSDIIHRAAFWQLPLWLSSPANWASGEMFFDAEREIYFPLRPPRPQGEVYRRYDPRVRKTLSFRVADPVLDAERFTRW
MNDPRVEYFWEQSGSLEVQTAYLERQLTSKHAFPLIGCFDDRPFSYFEIYWAAEDRIGRHYSWQPFDRGLHLLVGEQQWR
GAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRADNQRLFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucB NP_839222.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-138 94
iucB NP_709455.1 siderophore biosynthesis protein Virulence SHI-2 Protein 6e-138 94
iucB AAD44747.1 IucB Virulence SHI-2 Protein 5e-138 94
iucB AAK71632.1 IucB Virulence SHI-3 Protein 4e-138 94
iucB YP_002414045.1 aerobactin siderophore biosynthesis protein, N(6)-hydroxylysine acetylase Virulence Not named Protein 3e-137 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00972 YP_001452555.1 hypothetical protein VFG1082 Protein 2e-138 94
CKO_00972 YP_001452555.1 hypothetical protein VFG0939 Protein 1e-137 94
CKO_00972 YP_001452555.1 hypothetical protein VFG0616 Protein 2e-138 94