Gene Information

Name : CKO_00971 (CKO_00971)
Accession : YP_001452554.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4264
EC number : -
Position : 969475 - 971208 bp
Length : 1734 bp
Strand : -
Note : KEGG: ecc:c3625 0. iucC; iucC protein K03895; COG: COG4264 Siderophore synthetase component; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGAATCACAAGGATTGGGATTTTGTTAACCGCCAGCTGGTGGCAAAAATGCTGGCCGAGCTGGAGTATGAGCAGGTTTT
CCACGCGGAATCTCAGGGCGATGGCCGCTACTGCATTAACCTGCCGGGCGCGCAATGGCGCTTCAGAGCTGAACGCGGCA
TCTGGGGCTGGCTGTGGATTGATGCTCAAACGCTGCGCTGCGCGGACGAGCCCGTTCTGGCGCAAACGCTACTGATGCAG
CTAAAGCCGGTGCTGTCGATGAGCGATGCCACCGTTGCTGAGCATATGCAGGATTTGTATGCCACGCTGCTGGGCGACCT
GCAACTGCTGAAGGCACGGCGCGGGCTGAGCGCCAGTGACCTGATTGATCTTGATGCCGACCGCCTGCAATGCCTGCTAA
GCGGCCATCCTAAATTCGCTTTTAATAAAGGCCGTCGGGGCTGGGGCAAAGAGGCGCTGGAGCGATATGCGCCAGAGTAC
GCCAACACCTTCAGACTGCACTGGCTGGCGGTAAAACGTGAGCATATGGTCTGGCGCTGCGACAGCGAGCTGGATATTCA
GCAGTTGTTGACGGCCGCGATGGACCCGCAGGAGTTTGCCCGCTTCAATCAGGTCTGGCAGGACAACGGGCTGGATAACG
ACTGGCTGCCACTGCCGGTACATCCGTGGCAGTGGCAGCAAAAAATCGCCCTCGACTTCATCGCCGATCTTGCCGAAGGC
AGGATGGTTTCTCTCGGCGAGTTTGGCGACTTGTGGCTCGCCCAGCAGTCGCTGCGCACCCTGACCAACGCCAGTCGCCA
GGGCGGGCTGGATATCAAGCTGCCGCTGACCATCTACAACACCTCCTGCTACCGGGGGATTCCGGGCAAATACATCGCCG
CCGGGCCGCTGGCCTCACGCTGGCTGCAACAGGTTTTTGCGACCGACGCCACGCTTAAGCAAAGCGGCGCGGTGATCCTC
GGTGAACCGGCGGCGGGTTATGTGTCCCATGAAGGCTATGCCGCGCTTGCCCAGGCCCCCTACCGCTACCAGGAGATGCT
CGGCGTTATCTGGCGTGAGAATCCGTGTCGCTGGCTGAAGCCGGACGAAACTCCGATTCTGATGGCGACACTGATGGAGT
GCGATGAAAACAACCAGCCGCTGATAGGCGCATATATCGACCGCTCCGGGCTGGACGCTGAAACCTGGCTCACGCAGCTG
TTCCGGGTGGTAGTGGTTCCGCTGTATCACCTGCTTTGCCGCTACGGCGTCGCGCTTATCGCCCACGGACAAAATATAAC
GCTCGCCATGAAAGAGGGCGTACCGCAGCGCGTGCTGTTGAAAGACTTCCAGGGCGATATGCGGCTGGTGAAAGATGCGT
TCCCGGAGATGGACTCCCTGCCTCAGGAGGTGCGTGACGTCACCGCTCGCCTGAGCGCCGACTACTTAATTCATGATTTG
CAGACCGGCCACTTCGTGACGGTTCTGCGCTTTGTTTCGCCGCTGATGGCTCGCCTTGGCGTACCGGAGAGGCGTTTTTA
TCAACTGCTGGCAGCAGTGTTGAGTGATTACATGCAGGAACATCCACAAATGTCAGCGCGCTTTGCGCTTTTCTCACTCT
TCAAGCCACAAATCATTCGCGTAGTGCTGAACCCGGTAAAACTGACCTGGCCCGACCAGGACGGCGGCAGCCGCATGTTG
CCGAATTACCTTGAGGATCTGCAAAACCCGCTGTGGCTGGCAACCAGGGACTGA

Protein sequence :
MNHKDWDFVNRQLVAKMLAELEYEQVFHAESQGDGRYCINLPGAQWRFRAERGIWGWLWIDAQTLRCADEPVLAQTLLMQ
LKPVLSMSDATVAEHMQDLYATLLGDLQLLKARRGLSASDLIDLDADRLQCLLSGHPKFAFNKGRRGWGKEALERYAPEY
ANTFRLHWLAVKREHMVWRCDSELDIQQLLTAAMDPQEFARFNQVWQDNGLDNDWLPLPVHPWQWQQKIALDFIADLAEG
RMVSLGEFGDLWLAQQSLRTLTNASRQGGLDIKLPLTIYNTSCYRGIPGKYIAAGPLASRWLQQVFATDATLKQSGAVIL
GEPAAGYVSHEGYAALAQAPYRYQEMLGVIWRENPCRWLKPDETPILMATLMECDENNQPLIGAYIDRSGLDAETWLTQL
FRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLVKDAFPEMDSLPQEVRDVTARLSADYLIHDL
QTGHFVTVLRFVSPLMARLGVPERRFYQLLAAVLSDYMQEHPQMSARFALFSLFKPQIIRVVLNPVKLTWPDQDGGSRML
PNYLEDLQNPLWLATRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucC YP_002414044.1 Aerobactin siderophore biosynthesis protein Virulence Not named Protein 0.0 94
iucC AAK71633.1 IucC Virulence SHI-3 Protein 0.0 93
iucC NP_839221.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 93
iucC NP_709456.1 siderophore biosynthesis protein Virulence SHI-2 Protein 0.0 93
iucC AAD44748.1 IucC Virulence SHI-2 Protein 0.0 92

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00971 YP_001452554.1 hypothetical protein VFG0938 Protein 0.0 94
CKO_00971 YP_001452554.1 hypothetical protein VFG1083 Protein 0.0 93
CKO_00971 YP_001452554.1 hypothetical protein VFG0617 Protein 0.0 93