Gene Information

Name : CKO_00970 (CKO_00970)
Accession : YP_001452553.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG3486
EC number : -
Position : 968137 - 969471 bp
Length : 1335 bp
Strand : -
Note : KEGG: ssn:SSO_3604 9.3e-200 iucD; lysine:N6-hydroxylase K03897; COG: COG3486 Lysine/orniTHIne N-monooxygenase; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGACAAACACTGTAGATTTTATTGGCGTAGGCATCGGCCCGTTCAACCTGAGCATCGCGGCGCTGTCTCATCAGGCCGA
AGGATTAAGCAGCCGCTTCTTTGACGGCCGCCCGCATTTTGCCTGGCATCCCGGCATGCTGGTACCGGACTGCCATATGC
AGACCATGTTTCTGAAAGATCTGGTTAGCGCTGTGGCTCCCACAAGCCCGTACAGCTTTGTTAACTATCTGGTGAAGCGC
AAAAAATTCTACCGCTTCCTGACCACCGAACTGCGTACCGTGTCCCGCGATGAGTTTTCCGACTACCTGCGCTGGGCCGC
TGAAGGGATGAACAATCTGCATTTCAATCATACCGTTGAGAGTATTGATTTCGACGAGAGACGCCAGCGGTTTGTGGTGC
AGACCAGCCAGGGCGAAAGCGTTGCCCGCAATATCTGCCTTGGCATTGGCAAGCAACCGCACCTGCCGCCTTGCGTAAAA
ACGGCGACGCAAACCTGCTTCCACGCCAGTGAAATGAGCCTGCGCCAGCCAGACCTCGGCGGCAAGCGAGTCACCGTGGT
TGGCGGCGGGCAAAGCGGCGCCGACCTGTTCCTCAATGCGCTGCGCGGAGAATGGGGCGACGTTGCAGAGATCAGTTGGG
TCTCGCGCCGCAATAACTTTAACGCGCTGGATGAGGCGGCGTTCGCCAACGAATACTTCACGCCTGAGTACGTTTCAGGC
TTCGTCGGTCTGAATGAAAGCGCGCGCCAGAAGATGCTCGACGAGCAGAAAATGACCTCCGACGGCATCACGGCCGACTC
GCTACTGACCATTTATCGCGAGTTGTATCACCGCTTCGAGGTACTGAGGCAACCGCGTAACGCCCGTCTGCTGCCAAGCC
GCTCGGTCACAGGGCTGGAAAGTCGCGGCCAGAGCTGGCAACTGCTGCTGGAGCATCATCTGGATAACGGCTATGACACT
CTGGAAAGCGACGTGGTGATTTTCGCCACCGGCTACCGTCCCGCGCTGCCGCAGATACTTTCACCGCTGATGTCGCGAAT
CGCCATGCGCGATGAGTGCAATTTCAAAGTACGCGACGACTTCACCCTGGAGTGGAACGGCCCGAAAGAGAACAACATCT
TCGCGGTCAACGCCAGTATGCAAACCCACGGCATCGCCGAACCACAGCTCAGCCTGATGGCCTGGCGCTCCGCCCGTATT
CTTAATCGCGCGCTGGGGCGTGATTTATTCGATCTCAGTATGCCGCCCGCCCTGATTCAATGGCGCAGCGGCAGCCGGGA
AAAACCGCAGCCGGAGGCTGCTTCTTTAACTCGCTACACAGCATCTTTGGGCTGA

Protein sequence :
MTNTVDFIGVGIGPFNLSIAALSHQAEGLSSRFFDGRPHFAWHPGMLVPDCHMQTMFLKDLVSAVAPTSPYSFVNYLVKR
KKFYRFLTTELRTVSRDEFSDYLRWAAEGMNNLHFNHTVESIDFDERRQRFVVQTSQGESVARNICLGIGKQPHLPPCVK
TATQTCFHASEMSLRQPDLGGKRVTVVGGGQSGADLFLNALRGEWGDVAEISWVSRRNNFNALDEAAFANEYFTPEYVSG
FVGLNESARQKMLDEQKMTSDGITADSLLTIYRELYHRFEVLRQPRNARLLPSRSVTGLESRGQSWQLLLEHHLDNGYDT
LESDVVIFATGYRPALPQILSPLMSRIAMRDECNFKVRDDFTLEWNGPKENNIFAVNASMQTHGIAEPQLSLMAWRSARI
LNRALGRDLFDLSMPPALIQWRSGSREKPQPEAASLTRYTASLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iucD NP_709457.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-180 82
iucD YP_002414043.1 L-lysine 6-monooxygenase Virulence Not named Protein 3e-180 82
iucD AAK71634.1 IucD Virulence SHI-3 Protein 2e-178 82
iucD AAD44749.1 IucD Virulence SHI-2 Protein 3e-180 82
iucD NP_839220.1 lysine:N6-hydroxylase Virulence SHI-2 Protein 4e-180 82

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00970 YP_001452553.1 hypothetical protein VFG0618 Protein 2e-180 82
CKO_00970 YP_001452553.1 hypothetical protein VFG1084 Protein 1e-178 82
CKO_00970 YP_001452553.1 hypothetical protein VFG0937 Protein 1e-180 82