Gene Information

Name : CKO_00937 (CKO_00937)
Accession : YP_001452523.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 934600 - 935427 bp
Length : 828 bp
Strand : -
Note : COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: plasma membrane, score: 23

DNA sequence : 
ATGCTGAATATGCTCATTGAACCTTTCCGCTTTGACTTCATCAATTATGCCCTGATAATCGCGCTGCTGGTCTCTGTTCC
CTGCGCCCTGCTGTCTGTTTTTCTCGTGCTGAAAGGTTGGGCTCTGATGGGGGATGCCATGAGCCATGCCGTGTTTCCCG
GGGTTGTACTGGCCTGGATTGTAGGGTTGCCATTAGGCACCGGAGCTTTTGTGGCTGGATTATCCTGTGCTTTACTTACC
GGATATATTAAAGATAACAGCCGCATAAAGCAGGATACGCTGCTGGGTATCATTTTTTCGGGTATGTTCGCCTCCGGACT
GATTTTGTATGTCTCAGTCCGTCCGGATGCTCCGCTTGAACATATCCTCTTTGGCGACATGCTTGGTATAAACGCCACCG
ACATACTCCAGACGGGCACCATTGCCTTATTTATACTGCTGATTACCGGAATTAAATGGCGTGATTTCCTGCTTTACTGT
TTTGATATTCAGCAGGCCAGGGTCAGTGGACTACGGACGGGATGGCTCTATTACGGATTACTGAGCATGATTTCGCTTAC
TGTTGTCGCCACGCTAAAGTCCGTGGGGATTATTTTATCCGTCTCTTTGCTTATCGCGCCCGGTGCTATTGCAGTTCTTT
TGACGCAACGATTTAGCAACGCATTATTCATCGCTGTGGCTTTATCGGCTCTGGTATCAACGACCGGCGTTTACCTCTCT
TATTTCATTGATAGTGCGCCTGCGCCAACGGTTGTTTTGCTTTTTGCCCTGATATTTATAGTTATTTTTATATACTCAAG
CTTTAAATATAATGAGAAATATCTCTGA

Protein sequence : 
MLNMLIEPFRFDFINYALIIALLVSVPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAWIVGLPLGTGAFVAGLSCALLT
GYIKDNSRIKQDTLLGIIFSGMFASGLILYVSVRPDAPLEHILFGDMLGINATDILQTGTIALFILLITGIKWRDFLLYC
FDIQQARVSGLRTGWLYYGLLSMISLTVVATLKSVGIILSVSLLIAPGAIAVLLTQRFSNALFIAVALSALVSTTGVYLS
YFIDSAPAPTVVLLFALIFIVIFIYSSFKYNEKYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-78 68
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-78 68
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-78 68
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-78 68
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-78 68

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00937 YP_001452523.1 hypothetical protein BAC0352 Protein 7e-79 68
CKO_00937 YP_001452523.1 hypothetical protein BAC0442 Protein 1e-58 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00937 YP_001452523.1 hypothetical protein VFG0528 Protein 6e-79 68