Gene Information

Name : CKO_00915 (CKO_00915)
Accession : YP_001452501.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 915322 - 916602 bp
Length : 1281 bp
Strand : +
Note : KEGG: eci:UTI89_C0457 6.2e-19 ampG; AmpG muropeptide MFS transporter K08218; COG: COG0477 Permeases of the major facilitator superfamily; Psort location: plasma membrane, score: 23

DNA sequence :
ATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGGTGATTTTTGCTATTGCCGGCGTCTATGT
GACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTGCGCGCTGCTGGCGGATCGCTGGCGCTTG
CCGGTGCGACAACCCTGTTCATGCTGCCCTGGGCGCTGAAGTTTATTTGGGCGCCGTGGATCGAACGCTGGCGGCTTCCG
CCCGGTAGCCAGGAACGCCGTTCGCGGATGTTAATCCTGCGTGGTCAGGTCGCGCTAGCGGCGATCCTGATGATTGCCGC
AGCGATTGGCTGGTTTGGGCGAGAAGGAGGATTTCCCGATACGCAAATCGTCGCGTTATTTGTTCTGTTTATGGTGGCAG
GCACGGTCGCTTCCACCATTGATATCGCCAGCGACGGCTTTTGCGTCGATCAACTGACTCGCGCGGGTTACGGCTGGGGA
AACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGGTGTTCCTGATGTTGTCGGCAGCATCCGG
CTGGCCTGTCGCCATGCTGATGATGGCGATGCTGATTATGGCGCTGTCATTCCCGCTGTGGCGCATTACGGAGCCGACGC
GAACAGCGCCTATCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGAGGAAGCAGGCGCGCCTGGGCTTACTGCTGGTA
TTAATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCGCCGCTGTTGTTGGATCATGGGTTGAGCATGTCTGC
GTTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACGCTGGCCGGCGGATTACTGATGAAATACA
CCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCGCTGCTGGCGGTGGTGATGACGTTCATGATG
GCGCCGGGTCATCTGTTGCTGCCGATTCTCCAGTGTCTGGTCATTGTCCAGTCCATTTCGCTGGCCTGCGCGCTGGTCTG
TCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGACTTCACCCTCTTTCAATGTACTGACGCGG
CAATCGCCATCCTGGCTGGTGTTATCGGCGGCGTTGTTGCTCAACATTTTGGCTATGCGGCCTGCTTCCTGTTTGCCGGG
GTATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAAGAGAACTGATGACAAGCGCAATTGATTG
A

Protein sequence :
MSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALVRAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLP
PGSQERRSRMLILRGQVALAAILMIAAAIGWFGREGGFPDTQIVALFVLFMVAGTVASTIDIASDGFCVDQLTRAGYGWG
NSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAMLIMALSFPLWRITEPTRTAPIPHVPALGYALRRKQARLGLLLV
LMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGTLAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTFMM
APGHLLLPILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVDFTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAG
VFTLLAAWVAYIRLHSARELMTSAID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
irp8 YP_001006811.1 putative signal transducer Not tested HPI Protein 2e-136 99
irp8 YP_002346906.1 signal transducer Not tested HPI Protein 1e-137 99
ybtX YP_070128.1 MFS superfamily transporter signal transducer Virulence HPI Protein 1e-137 99
ybtX CAA21386.1 - Virulence HPI Protein 9e-137 99
ybtX YP_853071.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 2e-136 99
ybtX NP_669702.1 hypothetical protein Virulence HPI Protein 8e-137 99
ybtX NP_993011.1 signal transducer Virulence HPI Protein 8e-137 99
irp8 CAB46571.1 signal transducer, Irp8 Virulence HPI Protein 2e-135 98