Gene Information

Name : CKO_00896 (CKO_00896)
Accession : YP_001452482.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 881009 - 883747 bp
Length : 2739 bp
Strand : -
Note : COG: COG3451 Type IV secretory pathway, VirB4 components; Psort location: endoplasmic reticulum, score: 9

DNA sequence :
ATGGCAAAGCTGCTCAAGGCAATGAAACGCCCGGCGGCGCTGTGGGGGGTGCCAATGGTGCCCCTGCTGGCTGTCACGGG
TGTAACCATCATCGTTGCTATCTGGACTTCCGTCGCTCTCCTGTTCTTACTTCCTGTGCAATTTCTGGTGATGAAGTCCC
TTACCAGAAATGAACCGATGCGGTTCAATCTGATTGCCGTATGGCTGAGAGCGAAGGGAAAGCCGGTAGCAAACCGTTTA
TTTGGCGCAACAACATTTATGCCCGTTGAGCATGATGATGTTGATATCAAGGAGTTTCTCGACGCCATGAAACTAAATCA
GTGTGCCACCATCAAGAAGTACATCCCGTACTCATCGCACATTCATCAGCATGTGGTTCGTTCCCCTAAGAGCGATCTGT
ACTGCACCTGGGAATTGATGGGAACGCCGTTCGACTGCGAGTCTGACGAGTCGCTCCAGTTCGGGACGAACCAGTTACAC
GGGCTAATCCGCTCATTCGAAGGTATGCCAGTTACTTTCTATATCCATAACGACCGCAATACGTTTACCGACAATCTTCA
TAAAGATTCCGGCAACCCGTATGCCGATGAAGTTAGCCGTCTTTACTACGCTTCTGTCGGTCTGTTCCGGCGCAACCGCC
TGTTCCTGACGGTCTGCTATCGCCCGTTTGTCAGCCTTGAAAAAGCAGAACGCAAACGGATGAAAGACAGCCAGAAACTA
AAGGAGCTGGACGGTGCTTTGCTGGAAATGCTGGAAATAAAAAGCACGCTCGATACCGCGCTGTCGCGCTATGGTGCGCG
ACCTCTCGGTACGTTTACCGAAGGAAACGCGGTGTTTTCGTCGCAACTGGCTTTCTATGAATATCTGCTAACGCACCAGT
GGCGAAAAGTGCGCGTCACCCGTACCCCGGCCTATGACGTGATGGGGGCGGCGGCGTTGTTCTTTTCGGCTGAATCCGGG
CAGATAAACCACGCCAACGGTACGCAATATTTCCGGGGGCTGGAGGTTAAAGAGTTCTCCGAAGAGACCGCCACGGGGAT
GATGGACTCCCTTCTTTACGCCCCCTGCGATTACGTGATCACGCAGTCCTATACCTGCATGTCACGCGAGGAAGCGAAGA
AAGCCATTAAGCGTACCCGTCGCCTTTTGATGAGTGCCGACGACGATGCTGTTTCCCAGCGGCTGGATCTGGATGTGGCG
CTTGACCTGCTGACATCGGGGAAAATCGCTTACGGCAAGCACCATTTTTCCATCATGGTGTATTCCCCGTCGCTGGAAAG
CCTGGTTGCTGATACGAATGAAATCAGTAACGCGCTGAACAACATAGGGATAACGCCTGTTCCGGCAGAAATATCGCTTT
CAGCGGCGTATATGGCGCAACTGCCAGGCAACTACAACCTGAGGCCACGTAAAGGGGAGCTGAGTAGCCAGAACTTTGTG
GAGCTGGCCGCGCTCCATAATTTCTATCCGGGCAAGCGCGATAAAGCCCCCTGGGGGGATGCGATGGCTTTACTGCGCAC
CCCGTCAGGCGATGGCTACTATATCAACCTGCATAACACACTGGCAGATAAGGACGAATTCAACGAGAAGAACCCGGCCA
GTACCTGCATCCTCGGTACGAACGGTTCGGGTAAAACCATGTTGATGACGTTCTTTGAGATCATGCAGCAGAAATACGGG
CGCGAGGATAGCTTCTCCCCGGATGCCAAAACCAAACGGCTGACAACCGTTTACCTCGATAAAGACCGGGGCGCAGAGAT
GAACATCCGGGCGCTGGGTGGCCGTTACTATCGGGTTATCAGTGGTGAGTCTACAGGGTGGAACCCGTTCTCGTTGCCAG
CAACCAAACGCAATATCAATTTCATCAAGCAACTGATGAAAATCCTTTGTACCCGTAACGGCTCGACGATCTCCCCACGC
GATGAACGACGTCTGAGTGATGCGGTCAATGCTGTGATGAATGACGAGCCGCAATATCGCGTCTACGGCATTACCCGAAT
GCTGGAAAATTTGCCTGAGCCGGCTACGAAAGAAGCCCAGGAAAACGGCCTTAGCATTCGGTTGTCACAGTGGGCGCAGG
GCGGTGAGTTCGGCTGGGTGTTTGATAACGAGTCTGACACGTTCGATATCAGCAACTGCGATAACTTCGGCATCGACGGA
ACGGAGTTCCTGGACGATGCAAGCGTATGTGCGCCAATCTCGTTTTATCTGCTGTACCGCATTACCAGCCTGCTTGACGG
GCGACGCCTGGTCATTTTCATGGATGAATTCTGGAAGTGGTTACGCGACCCGGTGTTTAAGGACTTTGCTTATAACAAGC
TGAAAACCATCCGTAAGCTGAACGGGATGCTGGTCGTCGGTACTCAATCCCCGGCAGAGATCATCAAAGATGATATCGCC
CCGGCAGTGATTGAGCAGTGCGGGACACAGATTCTGGCGGCGAACCCCAACGCCGACCGCGCACACTATGTTGACGGTAT
GAAGTTTGAACCGGAAGTGTTCGACGTGGTGAAAGGGCTTGACCCGCAAGCCCGCCAGTATGTTGTGGTGAAAAATCAGT
TCAAGCGCGGCGATACCAAACGTTTTGCCGCTCGTGTCACGCTCGACCTGTCGGGTATCGGCAGATACACCAAAGTCATG
AGCGGCGATGCCCCCAACCTCGAAATATTCGAATCGATTTACCGGGAAGGAATGCAGCCTCATGAATGGCTCGATACCTA
CCTGGCTAAAGCGCTCTGA

Protein sequence :
MAKLLKAMKRPAALWGVPMVPLLAVTGVTIIVAIWTSVALLFLLPVQFLVMKSLTRNEPMRFNLIAVWLRAKGKPVANRL
FGATTFMPVEHDDVDIKEFLDAMKLNQCATIKKYIPYSSHIHQHVVRSPKSDLYCTWELMGTPFDCESDESLQFGTNQLH
GLIRSFEGMPVTFYIHNDRNTFTDNLHKDSGNPYADEVSRLYYASVGLFRRNRLFLTVCYRPFVSLEKAERKRMKDSQKL
KELDGALLEMLEIKSTLDTALSRYGARPLGTFTEGNAVFSSQLAFYEYLLTHQWRKVRVTRTPAYDVMGAAALFFSAESG
QINHANGTQYFRGLEVKEFSEETATGMMDSLLYAPCDYVITQSYTCMSREEAKKAIKRTRRLLMSADDDAVSQRLDLDVA
LDLLTSGKIAYGKHHFSIMVYSPSLESLVADTNEISNALNNIGITPVPAEISLSAAYMAQLPGNYNLRPRKGELSSQNFV
ELAALHNFYPGKRDKAPWGDAMALLRTPSGDGYYINLHNTLADKDEFNEKNPASTCILGTNGSGKTMLMTFFEIMQQKYG
REDSFSPDAKTKRLTTVYLDKDRGAEMNIRALGGRYYRVISGESTGWNPFSLPATKRNINFIKQLMKILCTRNGSTISPR
DERRLSDAVNAVMNDEPQYRVYGITRMLENLPEPATKEAQENGLSIRLSQWAQGGEFGWVFDNESDTFDISNCDNFGIDG
TEFLDDASVCAPISFYLLYRITSLLDGRRLVIFMDEFWKWLRDPVFKDFAYNKLKTIRKLNGMLVVGTQSPAEIIKDDIA
PAVIEQCGTQILAANPNADRAHYVDGMKFEPEVFDVVKGLDPQARQYVVVKNQFKRGDTKRFAARVTLDLSGIGRYTKVM
SGDAPNLEIFESIYREGMQPHEWLDTYLAKAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70302.1 Pilx3-4/VirB3-4-like protein Not tested HPI Protein 0.0 100

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_00896 YP_001452482.1 hypothetical protein BAC0398 Protein 0.0 57