Gene Information

Name : CKO_05109 (CKO_05109)
Accession : YP_001456588.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 4689454 - 4691535 bp
Length : 2082 bp
Strand : +
Note : catalyzes branch migration in Holliday junction intermediates

DNA sequence :
ATGAAAGGCCGTTTGCTGGATGCCATCCCGCTCAATTCCTTAACCGGTGTTGGCGCGGCGCAAAGCAGCAAACTGGCGAA
AATTGGCTTGCACACCGTGCAGGACCTCCTGTTGCACCTTCCCCTGCGTTATGAAGATCGCACCCATCTTTACCCGATTG
GCGAACTGCTGCCGGGCATTTACGCCACTGTTGAAGGCGAAGTGCTGAACTGCAATATCACCTTCGGCGGTCGCAGGATG
ATGACCTGCCAGATTAGCGATGGCTCCGGCATTCTCACCATGCGCTTTTTCAACTTCAGCGCGGCAATGAAAAACAGCCT
GGCGACCGGGCGGCGCGTACTGGCCTATGGTGAAGCCAAACGCGGGAAGTACGGCGCGGAGATGATTCACCCTGAATACC
GCGTGCAGGGCGATCTCAGCACGCCGGAGCTTCAGGAAACGCTCACACCCGTTTATCCGACCACCGAAGGCATTAAGCAA
GCCACGCTGCGTAAGCTCACCGACCAGGCGCTGGACCTGCTTGATACCTGCGCCATTGCCGAACTTCTGCCGCCTGAACT
TGCGCAAGGAATGACGAGCCTGCCGGAAGCCTTGCGCACGCTGCATCGCCCACCACCGTCGCTACAGCTTAGCGATCTGG
AAACCGGGCAGCATCCGGCGCAGCGACGCCTGATTCTGGAAGAACTACTGGCGCATAACCTGAGCATGCTGGCGCTGCGT
GCCGGCGCGCAGCGTTTTCACGCCCAGCGGCTTAGCGCGAACGATTCACTGAAAAATCAGCTGCTGGCCGCATTGCCGTT
CAAACCAACGGGTGCGCAGGCGCGCGTGGTGGCGGAGATAGAACGCGACATGGCGCTCGATGTGCCAATGATGCGTCTGG
TGCAGGGCGACGTCGGTTCCGGTAAAACGCTGGTCGCCGCACTGGCTGCGCTACGCGCCATTGCGCACGGCAAACAGGTG
GCGTTGATGGCGCCGACAGAACTGCTGGCCGAGCAGCATGCCAGTAACTTCCGCAACTGGTTTGCACCGCTTGGTATTGA
AGTGGGTTGGCTGGCAGGTAAACAGAAGGGGAAAGCGCGCCTGGCGCAGCAGGAAGCCATCGCCAGCGGGCAGGTACAGA
TGGTGGTCGGCACCCACGCGATTTTCCAGGAGCAGGTACAATTTAACGGGCTGGCGCTGGTGATTATCGATGAACAGCAC
CGCTTCGGCGTCCATCAACGTCTGGCGCTGTGGGAAAAAGGTCAGCAGCAGGGGTTCCACCCGCATCAGTTAATCATGAC
CGCAACGCCGATCCCCCGCACCCTGGCAATGACCGCCTATGCCGATCTCGATACCTCCGTGATTGATGAGCTACCGCCGG
GTCGCACACCTGTCACTACCGTTGCCATCCCGGACACCCGTCGTAGCGATATTATCGATCGCGTCCGCAATGCCTGTACC
CAGGAAGGCCGCCAGGCATACTGGGTCTGTACGTTGATTGAAGAGTCGGATTTGTTAGAAGCCCAGGCTGCGGAAGCGAC
ATGGGAAGAGCTCAGGCTCGCCTTACCGGAGTTGAAGATTGGTCTGGTTCATGGGCGAATGAAACCCGCAGAGAAGCAGG
CGGTGATGGCGGCCTTTAAGCAGGGTGAGCTGCACCTGCTGGTCGCAACAACGGTGATTGAAGTCGGGGTGGATGTCCCC
AACGCCAGCCTGATGATTATCGAAAACCCGGAACGGTTAGGTCTGGCACAATTACACCAGTTGCGTGGACGCGTGGGCCG
TGGCGCGGTGGCCTCCCATTGCGTACTACTCTACAAATCACCGCTCTCGAAAACCGCACAGAAGCGCCTTCAGGTCTTAC
GGGACAGCAACGACGGCTTTGTGATTGCGCAAAAGGATTTAGAGATTCGCGGCCCCGGTGAACTGCTGGGCACGCGTCAG
ACGGGTAACACCGAGTTCAAAGTGGCGGATTTGCTGCGCGATCAGGCCATTATCCCGGATGTTCAACGCATCGCCCGTCA
CATTCACGAACATTATCCGCAACAGGCAACCGCCCTGATTGAACGCTGGATGCCCGAAACCGAGCGTTATTCCAACGCCT
GA

Protein sequence :
MKGRLLDAIPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHLYPIGELLPGIYATVEGEVLNCNITFGGRRM
MTCQISDGSGILTMRFFNFSAAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGIKQ
ATLRKLTDQALDLLDTCAIAELLPPELAQGMTSLPEALRTLHRPPPSLQLSDLETGQHPAQRRLILEELLAHNLSMLALR
AGAQRFHAQRLSANDSLKNQLLAALPFKPTGAQARVVAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQV
ALMAPTELLAEQHASNFRNWFAPLGIEVGWLAGKQKGKARLAQQEAIASGQVQMVVGTHAIFQEQVQFNGLALVIIDEQH
RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRTPVTTVAIPDTRRSDIIDRVRNACT
QEGRQAYWVCTLIEESDLLEAQAAEATWEELRLALPELKIGLVHGRMKPAEKQAVMAAFKQGELHLLVATTVIEVGVDVP
NASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKSPLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQ
TGNTEFKVADLLRDQAIIPDVQRIARHIHEHYPQQATALIERWMPETERYSNA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 9e-103 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_05109 YP_001456588.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 61