Gene Information

Name : CKO_05043 (CKO_05043)
Accession : YP_001456522.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 4631858 - 4633396 bp
Length : 1539 bp
Strand : -
Note : KEGG: stm:STM3680 5.6e-273 aldB; aldehyde dehydrogenase B K00138; COG: COG1012 NAD-dependent aldehyde dehydrogenases; Psort location: endoplasmic reticulum, score: 9

DNA sequence :
ATGACCAATAATCCCCCTTCAACGCGTATTCAGCCCGGCGAGTATGGTTTTCCTCTGAAATTAAAAGCCCGCTACGACAA
CTTTATCGGCGGAGACTGGGTCGCACCGGTAGACGGCGAGTATTACCAGAATCTGACGCCGGTGACCGGGCAACTGCTGT
GTGAAGTCGCCTCTTCCGGCAAAAAAGATATCGATCTGGCGCTGGATGCCGCGCATAAAGTGAAAGAACAGTGGGCGCAT
ACGTCCGTGCAGGATCGCGCCGCGATTCTGTTTAAGATTGCCGATCGCATGGAGCAAAACCTGGAACTGCTGGCAACGGC
GGAAACCTGGGATAACGGCAAACCCATCCGTGAAACCAGCGCCGCCGACGTGCCGCTGGCGATCGACCATTTCCGCTATT
TTGCGTCCTGTATCCGCGCACAAGAGGGCGGTATCAGCGAAGTTGACAGCGAAACGGTGGCCTATCACTTCCATGAACCG
CTGGGCGTGGTGGGGCAGATCATCCCGTGGAACTTCCCGCTGCTGATGGCGAGCTGGAAAATGGCCCCGGCGCTGGCGGC
GGGGAACTGCGTAGTGCTCAAACCTGCGCGTCTGACGCCGCTTTCGGTTCTGTTGCTGATGGAAATCGTTGGCGATCTGC
TCCCGCCGGGCGTGGTCAACGTCGTGAACGGCGCGGGCGGAGAGATCGGCGAATATCTGGCGACGTCGAAGCGGATCGCG
AAGGTGGCGTTTACCGGTTCGACGGAAGTCGGGCAACAGATCATGCAGTACGCGACACAAAACATTATTCCGGTAACGCT
GGAGCTGGGCGGTAAGTCCCCCAATATCTTCTTCGCCGATGTGATGGATGAAGAGGATGCGTTTTTCGACAAGGCGCTGG
AGGGCTTTGCGCTGTTTGCCTTTAACCAGGGCGAAGTTTGTACCTGCCCGAGCCGTGCGCTGGTACAGGAGTCTATTTAT
GAGCGCTTTATGGAGCGGGCCATTCGTCGCGTCGAAAGCATTCGCAGCGGTAACCCGCTCGACAGCGTTACGCAGATGGG
CGCGCAGGTCTCCCAGGGTCAACTGGAAACCATCCTCAACTACATTGATATCGGTAAGAAAGAAGGCGCGGATGTGTTAA
CCGGCGGGCGGCGCAAGCAGCTGGAAGGAGAGCTGAAAGAGGGCTATTACCTCGAACCGACCATCCTGTTTGGTAAGAAC
AATATGCGCGTCTTCCAGGAGGAGATTTTTGGCCCGGTGCTGGCGGTGACGACCTTCAGGACGATGGAGGAAGCACTGGA
ACTGGCTAACGACACCCAGTACGGGCTTGGCGCCGGGGTCTGGAGTCGTAACGGCAACCTGGCATACAAAATGGGGCGCG
GTATTCAGGCGGGACGCGTATGGACCAACTGCTATCATGCTTACCCGGCGCATGCTGCGTTCGGCGGCTATAAGCAGTCG
GGGATTGGCCGCGAAACCCACAAAATGATGCTGGAGCATTATCAGCAAACCAAATGTCTGCTGGTGAGCTATTCCGATAA
ACCGCTGGGGCTGTTTTAA

Protein sequence :
MTNNPPSTRIQPGEYGFPLKLKARYDNFIGGDWVAPVDGEYYQNLTPVTGQLLCEVASSGKKDIDLALDAAHKVKEQWAH
TSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGVVNVVNGAGGEIGEYLATSKRIA
KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIY
ERFMERAIRRVESIRSGNPLDSVTQMGAQVSQGQLETILNYIDIGKKEGADVLTGGRRKQLEGELKEGYYLEPTILFGKN
NMRVFQEEIFGPVLAVTTFRTMEEALELANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS
GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-140 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-146 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-146 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-146 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-145 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_05043 YP_001456522.1 hypothetical protein VFG0082 Protein 1e-140 64