Gene Information

Name : CKO_04984 (CKO_04984)
Accession : YP_001456465.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0626
EC number : -
Position : 4577109 - 4578305 bp
Length : 1197 bp
Strand : +
Note : KEGG: tde:TDE2200 6.7e-126 megL; meTHIonine gamma-lyase K01761; COG: COG0626 CystaTHIonine beta-lyases/cystaTHIonine gamma-synthases; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGTCTGACTGTCGTACTTACGGATTCAACACCCAGATCGTTCACGCGGGGCAACAACCCGATCCTTCAACTGGCGCGCT
CAGTACGCCAATCTTCCAGACGTCGACGTTTGTTTTCGACAGCGCCGAACAGGGGGCCGCCCGCTTTGCGCTCGAAGAGT
CCGGGTACATTTACACCCGCCTGGGCAACCCCACGACGGACGCGCTGGAGAAAAAGCTGGCGGTACTGGAAAGAGGCGAA
GCAGCGCTGGCGACCGCGTCCGGCATTTCCGCCATCACCACCACGCTGCTGACGCTCTGTGAGCAGGGCGATCACATTGT
CTCAGCCAGCGCGATTTATGGCTGCACGCACGCATTTTTGTCGCACAGCATACCGAAGTTCGGTATTGACGTGAGTTTCG
TTAATGCCGCCAACCCGGATGAGATCCGCGAAGCCATCCGCCCGGAAACCAAAGTGGTGTACATCGAAACGCCCGCCAAC
CCAACGCTCTCCCTGGTCGATATCGAAACGGTCGCCGGGATCGCCCATCAGCGGGGCGTGCTGTTGGTTGTGGATAACAC
CTTTATGTCGCCGTACTGCCAGCAACCCCTGCTCCAGGGAGCCGATATCGTGGTTCACAGCGTCACGAAATACATCAACG
GACACGGGGATGTTATTGGCGGGGTCATCGTCGGCAAGCAGGAGTTTATCGATCAGGCGCGGTTTATCGGGCTGAAGGAT
ATCACCGGCGGCTGCATGAGCCCCTTTAACGCCTGGCTGACGCTGCGCGGCGTGAAGACGCTGGGGATTCGCATGGAGCG
CCACTGCGAGAACGCGCTGAAAATCGCCCGTTTCCTGGAAAGCCATCCGAAGATTACCCACGTCTGGTATCCGGGGCTTC
CTTCGCACCCGCAGTATGAACTTGGCAGACGCCAGATGAGCCTGCCCGGCGGCATTATCAGCTTCGAAATCGCGGGTGGC
CTGGAGGCTGGCAGACGCATGATCAATTCGGTAGAATTGTGCCTCCTCGCGGTCAGTCTCGGTGATACCGAAACCCTCAT
TCAGCACCCCGCGTCTATGACACATTCGCCTGTTGCGCCAGAGGAACGGCTTAAAGCAGGTATTACCGACGGGCTTATCC
GTCTTTCTGTGGGTCTTGAAGATCCAGAAGATATTATTAACGACCTTGAACACGCCATCAGAAAGGCGACATTCTGA

Protein sequence :
MSDCRTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGE
AALATASGISAITTTLLTLCEQGDHIVSASAIYGCTHAFLSHSIPKFGIDVSFVNAANPDEIREAIRPETKVVYIETPAN
PTLSLVDIETVAGIAHQRGVLLVVDNTFMSPYCQQPLLQGADIVVHSVTKYINGHGDVIGGVIVGKQEFIDQARFIGLKD
ITGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLESHPKITHVWYPGLPSHPQYELGRRQMSLPGGIISFEIAGG
LEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKATF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 4e-55 43
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-64 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-62 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_04984 YP_001456465.1 hypothetical protein BAC0207 Protein 6e-83 52