|
Name : CKO_04600 (CKO_04600) Accession : YP_001456087.1 Strain : Citrobacter koseri ATCC BAA-895 Genome accession: NC_009792 Putative virulence/resistance : Virulence Product : D-arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 4244621 - 4245607 bp Length : 987 bp Strand : + Note : KEGG: stm:STM3315 3.0e-162 yrbH; putative sugar phosphate isomerase K06041; COG: COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Psort location: cytoplasmic, score: 23 DNA sequence : ATGTCGCACTTAGCGTTACAACCGGGTTTTGACTTTCAGAAAGCAGGCAAAGACGTCCTGGAGATTGAACGTGAAGGCCT GGCGGAGCTTGACCAATACATCGACCAGAACTTCACGCTCGCCTGTGAAAAAATCTTCTCGTGCACAGGCAAAGTCGTTG TCATGGGGATGGGAAAATCAGGTCATATCGGGCGGAAAATGGCCGCCACCTTTGCCAGCACTGGCACTTCCGCCTTTTTT GTTCACCCAGGCGAGGCCGCGCATGGCGATCTCGGCATGGTCACCTCGCAGGATGTGGTGATCGCGATTTCCAACTCTGG CGAATCCAATGAGATTGCCGCATTAATCCCGGTTCTCAAACGCTTGCAGGTGCCGCTGATTTGTATCACCGGGCGGCCAG AAAGCAGCATGGCGCGTGCGGCGGATGTGCATCTGTGTGTTAAAGTGCCGAAAGAAGCCTGCCCGTTGGGTCTGGCGCCG ACCAGCAGCACCACGGCTACGCTGGTCATGGGCGATGCGCTCGCGGTCGCGTTATTAAAAGCCCGCGGCTTTACCGCCGA AGATTTTGCGTTGTCGCATCCGGGCGGCGCACTTGGCCGTAAACTTCTGCTGCGCGTTAACGATATCATGCACACCGGCG ATGAAATCCCGCATGTGAATAAAAACGCCAGCCTGCGTGATGCCCTGCTGGAAATTACGCGTAAAAATCTCGGCATGACC GTCATTTGTGATGACACAATGAAGATTGACGGCATCTTTACCGATGGCGACTTGCGTCGTGTTTTCGATATGGGTGTGGA TGTTCGCCAGTTAGGGATTGCCGACGTCATGACGCCAGGGGGAATTCGCGTTCGCCCCGGTATTCTCGCCGTTAACGCCC TGAACTTAATGCAGTCCCGTCATATCACCTCCGTTTTGGTTGCTGATGGCGACCAGTTACTGGGTGTGTTACATATGCAT GATTTACTGCGTGCAGGCGTAGTGTAG Protein sequence : MSHLALQPGFDFQKAGKDVLEIEREGLAELDQYIDQNFTLACEKIFSCTGKVVVMGMGKSGHIGRKMAATFASTGTSAFF VHPGEAAHGDLGMVTSQDVVIAISNSGESNEIAALIPVLKRLQVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAP TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVNKNASLRDALLEITRKNLGMT VICDDTMKIDGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVNALNLMQSRHITSVLVADGDQLLGVLHMH DLLRAGVV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 1e-39 | 43 |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 5e-40 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 7e-40 | 43 |
