Gene Information

Name : CKO_04092 (CKO_04092)
Accession : YP_001455594.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 3805075 - 3805935 bp
Length : 861 bp
Strand : +
Note : COG: COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components; Psort location: plasma membrane, score: 23

DNA sequence : 
ATGAACTGGCTTGTGGAACCGTTCGGCTACCAGTACATGCTCAACGCCATGTGGGTCTCGGCAATGGTCGGCGGCCTGTG
CGCCTTTCTCTCCTGCTATCTGATGCTTAAAGGCTGGTCGCTGATTGGCGACGCGCTTTCCCACTCCATCGTCCCCGGCG
TGGCGGGCGCGTATATGCTGGGGCTGCCCTTCTCTCTCGGCGCGTTTCTCTCCGGCGGCCTGGCGGCGGGCAGCATGCTT
TTTCTCAACCAGCGTTCACGCCTGAAGGAAGACGCGATTATCGGTCTTATCTTCTCCTCTTTCTTTGGCATCGGGCTGTT
TATGGTTTCGCTCAATCCGATGTCGGTCAACATCCAGACCATTATCCTCGGCAACGTGCTGGCTATTGCGCCAGAAGATA
TTCTGCAACTGGCGATCATCGGCACGGTCTCTCTGGTGATTTTGCTGCTGAAGTGGAAAGATCTGATGGTGACTTTTTTC
GACGAAAACCATGCGCGATCGATTGGGCTTAACCCCGCCCGGCTGAAGCTGCTGTTTTTCACGTTGCTGTCGGTCTCCAC
CGTCGCCGCTCTGCAAACCGTCGGCGCTTTTCTGGTGATCTGTCTGGTGGTCACGCCTGGCGCCACCGCCTGGCTGCTGA
CCGATCGTTTTCCGCGCCTGTTAACCATCGCCGTCGCCATTGGCAGCCTGACCAGCTTTTTCGGCGCCTGGCTCAGCTAC
TGGCTGGATGGTGCGACCGGCGGGATCATCGTCGTCCTGCAAACGCTATTATTTCTGCTGGCATTTATCTTCGCCCCGAA
ACACGGCCTGCTTGCCAACCGCCGTCGTGCGCGCCTGAATAAGGAGACCCCATGCGCTTAA

Protein sequence : 
MNWLVEPFGYQYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFLSGGLAAGSML
FLNQRSRLKEDAIIGLIFSSFFGIGLFMVSLNPMSVNIQTIILGNVLAIAPEDILQLAIIGTVSLVILLLKWKDLMVTFF
DENHARSIGLNPARLKLLFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFPRLLTIAVAIGSLTSFFGAWLSY
WLDGATGGIIVVLQTLLFLLAFIFAPKHGLLANRRRARLNKETPCA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 5e-92 94
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 4e-92 94
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 5e-92 94
sitC NP_461784.1 permease Virulence SPI-1 Protein 5e-92 94
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 5e-92 94
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 2e-34 42
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 7e-35 42
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 2e-34 42
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-34 42
sitD NP_461785.1 permease Virulence SPI-1 Protein 1e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_04092 YP_001455594.1 hypothetical protein BAC0351 Protein 2e-92 94
CKO_04092 YP_001455594.1 hypothetical protein BAC0441 Protein 6e-66 70
CKO_04092 YP_001455594.1 hypothetical protein BAC0352 Protein 5e-35 42
CKO_04092 YP_001455594.1 hypothetical protein BAC0442 Protein 1e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_04092 YP_001455594.1 hypothetical protein VFG0527 Protein 2e-92 94
CKO_04092 YP_001455594.1 hypothetical protein VFG0528 Protein 4e-35 42