Gene Information

Name : CKO_04090 (CKO_04090)
Accession : YP_001455592.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 3803328 - 3804260 bp
Length : 933 bp
Strand : +
Note : COG: COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin; Psort location: mitochondrial, score: 23

DNA sequence : 
ATGATGAGGGATACTATGCCGCACTTGCTCCGTCTGAAATCCATTCTCCTTGCCAGCGCGCTGGCGATGCTTGCGCTGTC
GCCTGCTTATGCAAAAGATAAATTTAAGGTCATCACAACGTTTACCGTCATCGCCGACATGGCGAAAAACGTAGCGGGCG
ATGCGGCGGACGTCAGTTCAATCACGAAGCCTGGCGCGGAGATCCACGAGTATCAGCCGACGCCCGGCGACATTAAGCGG
GCGCAGGGCGCGCAGCTGATCCTCTCTAACGGCCTGAACCTGGAGCTGTGGTTCGCCCGGTTCTACCAGCACTTATCCGG
CGTGCCGGAAGTTACGGTATCCAACGGCGTGAAGCCGATGGGCATTACCGAAGGGCCGTATAACGGCAAACCCAACCCGC
ACGCCTGGATGTCGGCGGAAAATGCGCTGATTTACGTGGATAACATTCGCGATGCGCTGGTGAAATACGATCCAGATAAC
ACCGCGACATACCAGAAAAACGCCGAAAACTATAAAGCCCAAATCCGCCAGACGCTCGATCCACTACGCGACGCACTGGC
GAAGATTCCTGCCGACAAGCGCTGGCTGGTGACCAGTGAAGGCGCATTTTCCTATCTGGCGCGCGATAACGACCTGAAAG
AGCTGTACCTCTGGCCGATCAACGCCGATCAGCAAGGCACGCCTAAACAGGTACGCAAAGTGATCGACGCGATCAGGGAA
CATCACATCCCGGCGGTGTTCAGCGAAAGTACCGTTTCCGATAAACCGGCCCGCCAGGTCGCGCGTGAATCCGGCGCGCA
CTACGGCGGTGTGCTATATGTTGATTCTCTGAGCGCTGCCGACGGTCCGGTGCCGACGTATCTGGATCTGCTGCGCGTCA
CAACTGAAACCATCGTCAGCGGCATCACTGACGGGCTGAGGAGCCAGAAATGA

Protein sequence : 
MMRDTMPHLLRLKSILLASALAMLALSPAYAKDKFKVITTFTVIADMAKNVAGDAADVSSITKPGAEIHEYQPTPGDIKR
AQGAQLILSNGLNLELWFARFYQHLSGVPEVTVSNGVKPMGITEGPYNGKPNPHAWMSAENALIYVDNIRDALVKYDPDN
TATYQKNAENYKAQIRQTLDPLRDALAKIPADKRWLVTSEGAFSYLARDNDLKELYLWPINADQQGTPKQVRKVIDAIRE
HHIPAVFSESTVSDKPARQVARESGAHYGGVLYVDSLSAADGPVPTYLDLLRVTTETIVSGITDGLRSQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 4e-120 91
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 4e-120 91
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 4e-120 91
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 3e-120 91
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-120 91

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_04090 YP_001455592.1 hypothetical protein BAC0349 Protein 2e-120 91
CKO_04090 YP_001455592.1 hypothetical protein BAC0439 Protein 3e-88 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_04090 YP_001455592.1 hypothetical protein VFG0525 Protein 2e-120 91