Gene Information

Name : CKO_03944 (CKO_03944)
Accession : YP_001455452.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 3673469 - 3674740 bp
Length : 1272 bp
Strand : +
Note : COG: COG0582 Integrase; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGGGACCCACAACGAAGGGTCCTAAAATCGAGGGTCCCAAAATGGCAAAAATCGCTAAGAAACTCACTGACACTGAAAT
CAAAAGCACTAAGCCAACCGACAAAGAAATCAACTTGTTTGACGGTGATGGTTTGATCCTGCGAATCTCTGCTCTCGCAA
AAGGAGGGAAGAAGAATTGGTATTTCAGGTATGCAGTGCCGGTGAGTAAGAAAAGAACCAAAATGAGCCTTGGGACCTAT
CCTCACCTTACACTGGCTAGAGCCAGAGCCTTACGAGATGAATACCTTTCCTTGCTTGCCAATGGCATTGATCCGCAAGT
CCATAACAACGATAAAGCTAATGCCTTAAAGAATGCTACTGAACACACTCTCCAAGCCGTGGCAAGGAAATGGTTAGATG
AAAAGGTAAAGACCTCAGGTATCTCACAAGACCATGCAGAAGACATCTGGCGAAGCCTGGAGAGAAACATCTTTCCCGGC
TTGGGTAATGTTCCTATCAATGAGATCCGCCCCAAACTCTTAAAGCAACATCTTGACCCTATTGAGCAACGAGGAGTACT
CGAAACTTTACGGCGAATCATTTCCCGATTAAATGAAATTTTCCGTTATGCAACAACTGAGGAACTTATCGAATTCAATC
CGGCTGACAACCTGGGGCAACGGTTCAGTAAGCCTAAAAAACAGAATATGCCAGCATTACCCCCTTCCGAACTCCCCCGC
TTCCTAGTTGCTCTAAACAATGCTTCTATCCGTTTAGAAACAAGGCTACTGATTGAGTGGCAACTTCTCACATGGGTTCG
CCCTGGTGAAGCAGTTCGCACAAGATGGTCAGATATTGATATAGAAACCGGCATGTGGAACATACCATCGGATTTTATGA
AAATGAAGAAGCCTCACAAAGTTCCACTAAGCAAAGAAGCTTTGCGAGTCCTGGAGTCAATGAAAGCGATAAGTGGACAT
CGTGAATGGGTGTTTCCAAGTATAAAGGCTCCTCTTAGCCATATGCATGAACAAACAGCTAATGCGGCCATAATCCGTAT
GGGCTTTGGGGGAGAGCTTGTAGCCCATGGAATGAGATCTATTGCACGAACGGCCGCAGAGGAGTCGGGTAAGTTCAGGA
CAGATGTCTTAGAAGCGGCCCTTGCCCATTCGAAGAAAGATGAAATCATCGCAGCCTATAATCGTGCAGAATACTTAGCA
GAACGAGTAGTTCTCATGCAGTGGTGGAGCGATTACGTCATTGCTCAAAAATTTAAGGCTATTGCGGCGTAA

Protein sequence :
MGPTTKGPKIEGPKMAKIAKKLTDTEIKSTKPTDKEINLFDGDGLILRISALAKGGKKNWYFRYAVPVSKKRTKMSLGTY
PHLTLARARALRDEYLSLLANGIDPQVHNNDKANALKNATEHTLQAVARKWLDEKVKTSGISQDHAEDIWRSLERNIFPG
LGNVPINEIRPKLLKQHLDPIEQRGVLETLRRIISRLNEIFRYATTEELIEFNPADNLGQRFSKPKKQNMPALPPSELPR
FLVALNNASIRLETRLLIEWQLLTWVRPGEAVRTRWSDIDIETGMWNIPSDFMKMKKPHKVPLSKEALRVLESMKAISGH
REWVFPSIKAPLSHMHEQTANAAIIRMGFGGELVAHGMRSIARTAAEESGKFRTDVLEAALAHSKKDEIIAAYNRAEYLA
ERVVLMQWWSDYVIAQKFKAIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 2e-83 46
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 2e-83 46
int AAK20773.1 integrase Not tested VPI Protein 1e-83 46
int AAK20803.1 integrase Not tested VPI Protein 1e-83 46
unnamed AAA82714.1 integrase Not tested VPI Protein 1e-83 46
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 9e-82 44
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 3e-68 41