Gene Information

Name : alr (CKO_03857)
Accession : YP_001455368.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : -
Position : 3590627 - 3591706 bp
Length : 1080 bp
Strand : -
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
ATGCAAGCGGCAACTGTAGTCATTAACCGCCGCGCTCTGCGACACAATCTGCAACGTCTGCGTGAACTGGCGCCTGCCAG
CAAGCTGGTTGCGGTCGTGAAAGCGAACGCTTACGGACACGGTCTTCTGGAGACCGCGCGAACGCTCCCTGATGCCGACG
CTTTCGGCGTCGCCCGCCTTGAAGAAGCCCTGCGCCTGCGGGCGGGCGGGATCACGCAGCCCATTCTGTTGCTGGAAGGT
TTTTTTGAAGCCACCGATCTGCCAGTCATCTCTGCGCAGCATCTGCATACCGCCGTGCATAACGAAGAACAGCTTGCCGC
GCTGGAAGCCGCCGGGCTGGATGAGCCGGTAACGGTGTGGATGAAACTGGATACGGGAATGCATCGTCTGGGCGTGCGTC
CTGAAAAAGCCGAAGCGTTTTATCAACGGCTTACGCAGTGTAAAAACGTGCGCCAGCCGGTAAATATCGTCAGCCATTTT
GCCCGCGCCGATGAGCCGGAATGCGGCGCGACCGAGCAGCAACTCGATATTTTTAATACCTTCTGCGAAGGTAAACCGGG
GCAACGCTCCATCGCCGCTTCCGGCGGCATCCTGCTGTGGCCGCAGTCTCATTTTGACTGGGCGCGACCGGGCATCATCC
TCTATGGCGTCTCGCCGCTGGAAAATCAGTCCACTGGCGAAGATTTTGGCTGCCAGCCGGTCATGTCGCTAATCTCCAGC
CTCATTGCCGTTCGCGAGCATAAAGCGGGCGAACCGGTGGGTTACGGCGGCACATGGATCAGCGAGCGCGATACGTGTCT
GGGCGTGGTTGCTATGGGCTATGGCGACGGTTATCCGCGCGCGGCGCCGTCCGGTACGCCGGTGCTGGTTAATGGTCGGG
AAGTGACGATTGTTGGTCGCGTGGCGATGGACATGATCTGCGTCGATTTAGGCCCTCAGGCGCAGGACAAAGCAGGCGAT
CCGGTCATTTTGTGGGGTGAAGGTCTGCCCGTTGAGCGCATTGCGGAAATGACAAAAGTGAGTGCTTACGAACTTATCAC
ACGCCTGACATCAAGGGTTGCGATGAAGTACATCGATTAA

Protein sequence :
MQAATVVINRRALRHNLQRLRELAPASKLVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITQPILLLEG
FFEATDLPVISAQHLHTAVHNEEQLAALEAAGLDEPVTVWMKLDTGMHRLGVRPEKAEAFYQRLTQCKNVRQPVNIVSHF
ARADEPECGATEQQLDIFNTFCEGKPGQRSIAASGGILLWPQSHFDWARPGIILYGVSPLENQSTGEDFGCQPVMSLISS
LIAVREHKAGEPVGYGGTWISERDTCLGVVAMGYGDGYPRAAPSGTPVLVNGREVTIVGRVAMDMICVDLGPQAQDKAGD
PVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 2e-54 42