Gene Information

Name : CKO_03752 (CKO_03752)
Accession : YP_001455264.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3492534 - 3493202 bp
Length : 669 bp
Strand : +
Note : response regulator in two-component regulatory system with BasS

DNA sequence : 
ATGAAAATTCTGATTGTTGAAGACGATACGCTGTTATTACAGGGACTGATACTTGCTGCACAAACGGAGGGTTACGCCTG
CGACGGCGTTTCTACCGCCCGGGCGGCGGAACACTGTCTGGAAACAGGGCATTACAGCCTGGTCGTGCTGGATCTTGGGT
TGCCTGATGAGGACGGTCTGCATTTTCTGACGCGAATAAGACAGAAAAAATACACCCTTCCGGTATTGATCCTCACCGCC
CGCGACACGCTCAACGACCGCATCACCGGGCTGGATGTCGGGGCGGATGATTATCTGGTGAAGCCGTTTGCGCTGGAGGA
GTTACATGCGCGTATTCGCGCGCTGCTGCGCCGTCACCACAATCAGGGTGAAAGCGAATTGACCGTCGGCAATCTGATGC
TGAATCTGGGGCGTCGTCAGGTGTGGCTGGCCGGGCAAGAGCTTATCTTAACGCCCAAAGAGTATGCGCTGCTGTCGCGG
CTGATGCTCAAAGCAGGCAGCCCGGTACACCGTGAAATCTTGTATAACGACATCTATAACTGGGACAACGAACCGTCAAC
CAATACCCTGGAAGTGCATATTCACAACCTGCGCGACAAAGTGGGGAAATCACGTATCCGCACGGTGCGCGGGTTTGGTT
ATATGCTGGTTGCCGTTGAGGAAAACTAA

Protein sequence : 
MKILIVEDDTLLLQGLILAAQTEGYACDGVSTARAAEHCLETGHYSLVVLDLGLPDEDGLHFLTRIRQKKYTLPVLILTA
RDTLNDRITGLDVGADDYLVKPFALEELHARIRALLRRHHNQGESELTVGNLMLNLGRRQVWLAGQELILTPKEYALLSR
LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVAVEEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-30 43
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-20 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-19 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_03752 YP_001455264.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 8e-55 61
CKO_03752 YP_001455264.1 DNA-binding transcriptional regulator BasR NC_002516.2.879194.p Protein 3e-23 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_03752 YP_001455264.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 2e-86 95
CKO_03752 YP_001455264.1 DNA-binding transcriptional regulator BasR VFG0596 Protein 5e-21 42