Gene Information

Name : CKO_03572 (CKO_03572)
Accession : YP_001455087.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Unknown
Product : trehalose-6-phosphate hydrolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 3324584 - 3326239 bp
Length : 1656 bp
Strand : +
Note : KEGG: stm:STM4453 2.1e-282 treC; trehalose-6-phosphate hydrolase K01226; COG: COG0366 Glycosidases; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGAATACCCTTCCCCACTGGTGGCAAAACGGCGTTATTTACCAGATCTATCCCAAAAGTTTTCAGGACACGACCGGCAG
CGGAACCGGCGATTTACGCGGCGTTACGCAGCGTCTTGATTACCTGCAAAAACTGGGGGTGGATGCTATCTGGCTGACGC
CATTCTATGTTTCACCGCAGATTGATAACGGCTACGACGTCGCGAACTACACCGCCATCGACCCGGCCTACGGCACGCTG
GATGATTTTGACGAACTGGCGGCGCAGGCCAAAGCGCGCGGCATCCGCATTATTCTGGATATGGTGTTTAACCACACCTC
CACGCAGCATGCCTGGTTCCATAACGCGCTGAATAAAGAGAGTCCGCACCGGGAGTTTTATATCTGGCGCGACGGTACGC
CGGATGCGCCGCCCAATAACTGGCGCTCCAAATTTGGCGGCAGCGCCTGGCGCTGGCATGCCCAGAGCGAACAGTATTAC
CTGCACCTTTTCGCCCCGGAGCAGGCTGACCTGAACTGGGAAAATCCGGCGGTACGCGCTGAGCTGAAAAAAGTGTGTGA
ATTCTGGGCCGATCGCGGCGTGGACGGGCTGCGCCTGGATGTCGTGAACCTCATCTCCAAGGATCAGCGTTTCCCGAACG
ATCTGGACGGCGATGGTCGCCGCTTTTACACCGACGGGCCGCGCGCGCATGAGTTCTTGCACGAGATGAACCGTGACGTT
TTTACTCCGCGTAACCTGATGACGGTGGGCGAAATGTCATCCACCACCCTGGAAAACTGTCAGCGGTATGCCGCTCTCGA
TGGCAGCGAGCTGTCGATGACCTTTAACTTCCATCATCTGAAAGTCGATTATCCCGGCGGCGAGAAATGGACGCTGGCAA
AGCCGGATTACGTGGCGCTAAAAGCACTGTTTCGCCACTGGCAGCAGGGGATGCATAACGTTGCCTGGAATGCCCTGTTC
TGGTGTAACCACGATCAGCCGCGTATCGTGTCGCGCTTTGGCGACGAAGGCGAACTGCGGGTTCCGGCGGCGAAGATGCT
GGCGATGGTGCTGCACGGTATGCAGGGTACGCCCTATATCTACCAGGGCGAAGAAATTGGCATGACAAACCCGCATTTCT
CCCACATCACCGATTACCGTGACGTGGAAAGCCACAACATGTTTGCCGGGTTGCGCGCCCAGGGCCGGGAAGCCAATGAT
TTACTGGCTATTCTTGCCAGCAAATCCCGCGATAACAGCCGCACGCCCATGCAGTGGGATAGCAGCGCGAATGCAGGGTT
TACGCAAGGCGAGCCGTGGATCAACCTCTGCGATAACTATGCGGACATCAACGTGGCGGCGGCGCTAAATGATGAAGACT
CGGTGTTCTACACCTATCAAAGACTGATTGCCTTGCGCAAAACAGAGCCGGTCTTAACCTGGGGGAATTATCAGGATCTG
CTGCCGGACAGCCCGCATGTATGGTGCTATCGCCGCGAATGGCAGGGGCAGCGGCTACTGGTGGTCGCCAACCTGAGCAA
CGCCTGTCAGGCCTGGTTGCCAGAGCATCACGAAGGAAACTGGCAGGCGCTGATGCACAACTACGACGAGGTTGCCACCC
GCCCAGCCGCCATGACGTTACGCCCGTTTGAGGCCGTCTGGTGGTTGCAAAAGTAA

Protein sequence :
MNTLPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQKLGVDAIWLTPFYVSPQIDNGYDVANYTAIDPAYGTL
DDFDELAAQAKARGIRIILDMVFNHTSTQHAWFHNALNKESPHREFYIWRDGTPDAPPNNWRSKFGGSAWRWHAQSEQYY
LHLFAPEQADLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLISKDQRFPNDLDGDGRRFYTDGPRAHEFLHEMNRDV
FTPRNLMTVGEMSSTTLENCQRYAALDGSELSMTFNFHHLKVDYPGGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALF
WCNHDQPRIVSRFGDEGELRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFSHITDYRDVESHNMFAGLRAQGREAND
LLAILASKSRDNSRTPMQWDSSANAGFTQGEPWINLCDNYADINVAAALNDEDSVFYTYQRLIALRKTEPVLTWGNYQDL
LPDSPHVWCYRREWQGQRLLVVANLSNACQAWLPEHHEGNWQALMHNYDEVATRPAAMTLRPFEAVWWLQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 5e-123 44