Gene Information

Name : CKO_03180 (CKO_03180)
Accession : YP_001454701.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1982
EC number : -
Position : 2942542 - 2944680 bp
Length : 2139 bp
Strand : -
Note : KEGG: eco:b0186 0. ldcC; lysine decarboxylase 2, constitutive K01582; COG: COG1982 Arginine/lysine/orniTHIne decarboxylases; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGAATATCATTGCCATCATGGGGCCGCATGGCGTTTTTTATAAAGACGAACCCATCAAGGAACTTGAGCTTGCCCTACA
GTCTCAGGGGTTTCAGATTATCTGGCCGCAAAATAGCGTCGACCTGCTGAAATTCATTGAACACAATCCGCGAATCTGTG
GCGTCATTTTTGACTGGGATGAGTACAGCCTCGATTTGTGTAGCGATATCAACCAGCTAAATGAATACCTGCCGTTGTAT
GCGTTTATCAATACGCATTCGACGATGGATGTCAGCGTGCATGATATGCGTATGGCACTGTGGTTTTTTGAATACGCGCT
CGGCCAGTCAGAAGATATTGCAACCCGCATCCGCCAGTATACGAATGAATACCTTGATAACATCACGCCGCCGTTCACCC
GGGCGCTGTTTACCTATGTGAAGGAAGGGAAGTATACCTTCTGTACGCCGGGACATATGGCGGGAACCGCTTACCAGAAA
AGCCCGATTGGCTGTCTGTTTTATGACTTCTTCGGAGGGAATACGCTAAAAGCGGATGTGTCTATTTCCGTGACCGAACT
GGGTTCGCTGCTGGACCATACCGGGCCGCACCTGGAGGCGGAAGAGTATATTGCCCGCACCTTCGGCGCCGAGCAGAGTT
ATATGGTGACCAACGGCACCTCCACATCGAACAAAATTGTCGGCATGTACGCGGCGCCGTCGGGCAGCACGCTGCTGATT
GACCGTAACTGCCATAAATCTCTCGCGCACCTGTTGATGATGAGCGATGTGGTGCCCCTCTGGCTGAAACCCACGCGCAA
CGCACTCGGTATTCTGGGGGGCATTCCTAAGCGTGAATTTACGCGTGAGAGTATTGAACATAAGGTTTCGGAGACGGCGC
AGGCGCAGTGGCCGGTACATGCGGTTATCACCAACTCGACCTATGACGGCCTGCTGTACAACACCAACTGGATTAAACAA
ACGCTGGATGTCCCTTCGATCCATTTCGACTCGGCCTGGGTGCCCTATACCCATTTTCACCCGATTTATCAGGGGAAAAG
CGGGATGAGCGGCGAGCGGGTGCCGGGAAAAGTCATCTTCGAAACGCAGTCGACGCATAAAATGCTGGCGGCGCTGTCTC
AGGCATCGCTTATTCACATTAAAGGGGATTACGATGAAGATACCTTTAATGAAGCGTTTATGATGCACACCTCAACATCG
CCAAGCTACCCCATCGTGGCGTCGATTGAGACGGCTGCGGCAATGCTGCGTGGCAATCCGGGTAAACGATTGATCAATCG
CTCCGTGGAGCGGGCGCTTCATTTTCGCAAAGAGGTACAGCGGCTGCGCGAAGAGTCGGAAGGCTGGTTCTTTGATATCT
GGCAACCGGAAGAGGTGGATGAAGCGGAATGCTGGCCCGTTGCGCCCGGCGAGGAGTGGCACGGTTTTACCGATGCGGAT
GCCGACCATATGTTTCTCGATCCGGTGAAAGTCACCATTTTGACGCCCGGTATGGATGAGCAGGGTAACATGAGCGAGGA
GGGGATCCCCGCCGCGCTGGTGGCGAAGTTCCTTGATGAGCGCGGCGTGGTGGTAGAAAAAACCGGGCCTTATAACCTGC
TGTTCCTGTTCAGTATTGGTATTGATAAAACCCGGGCGATGGGATTGCTGCGCGGCCTGACGGAGTTTAAACGCGCTTAC
GATCTTAATCTGCGCGTTAAAAATATGCTGCCGGATCTGTACGCCGAAGATCCCGATTTTTATCGTAATATGCGGATTCA
GGATCTGGCGCAGGGTATCCATAAACTGATCCGCCAGCACGATCTTTCCGGGTTGATGCTACGGGCGTTCGACACATTGC
CCGAAATGAAAATGACGCCGCATCAGGCCTGGCAGAGGCAGATAAAAGGCGAAGTGGAGACTATCGCGATTGATCAACTG
GTGGGGCGTATTTCCGCCAGTATGGTGCTGCCGTATCCGCCTGGCGTGCCGTTGCTGATGCCGGGGGAGATGATCACCGA
AGCGAGCCGTGCGGTACTCGATTTTCTGCTGATGCTGTGTTCCATCGGCCACCATTACCCTGGCTTTGAGACCGATATTC
ATGGCGCAAAACAGGATGAGGATGGCGTTTACCGAGTGAGAGTCTTAAAAACGGCATGA

Protein sequence :
MNIIAIMGPHGVFYKDEPIKELELALQSQGFQIIWPQNSVDLLKFIEHNPRICGVIFDWDEYSLDLCSDINQLNEYLPLY
AFINTHSTMDVSVHDMRMALWFFEYALGQSEDIATRIRQYTNEYLDNITPPFTRALFTYVKEGKYTFCTPGHMAGTAYQK
SPIGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAEEYIARTFGAEQSYMVTNGTSTSNKIVGMYAAPSGSTLLI
DRNCHKSLAHLLMMSDVVPLWLKPTRNALGILGGIPKREFTRESIEHKVSETAQAQWPVHAVITNSTYDGLLYNTNWIKQ
TLDVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAALSQASLIHIKGDYDEDTFNEAFMMHTSTS
PSYPIVASIETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESEGWFFDIWQPEEVDEAECWPVAPGEEWHGFTDAD
ADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGVVVEKTGPYNLLFLFSIGIDKTRAMGLLRGLTEFKRAY
DLNLRVKNMLPDLYAEDPDFYRNMRIQDLAQGIHKLIRQHDLSGLMLRAFDTLPEMKMTPHQAWQRQIKGEVETIAIDQL
VGRISASMVLPYPPGVPLLMPGEMITEASRAVLDFLLMLCSIGHHYPGFETDIHGAKQDEDGVYRVRVLKTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadA NP_756988.1 lysine decarboxylase, inducible Not tested PAI II CFT073 Protein 0.0 70
unnamed CAD66195.1 putative cadaverin decarboxylase Virulence PAI III 536 Protein 0.0 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_03180 YP_001454701.1 hypothetical protein VFG1670 Protein 0.0 61