Gene Information

Name : rdgC (CKO_02778)
Accession : YP_001454320.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Unknown
Product : recombination associated protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2974
EC number : -
Position : 2577478 - 2578455 bp
Length : 978 bp
Strand : +
Note : Required for efficient pilin antigenic variation

DNA sequence :
ATGCAAGCCCGCCGACAATTCGTTATTATACCCGCTGGATTTAACGACAAGGCCGTGGAAATTATCATGCTGTGGTTCAA
AAATTTAATGGTTTACCGTCTTAGCCGCGATATTTCGTTGCGCGCCGAGGAGATGGAAAAACAGCTAGCCTCGATGACGT
TTACCCCTTGCGGCAGCCAGGATATGGCAAAAATGGGCTGGGTTCCGCCAATGGGCTCGCACAGCGATGCGTTAACGCAT
ACCGCCAATGGCCAAATTATTATCTGCGCGCGCAAAGAAGAGAAGATTCTGCCGTCGCCGGTGATCAAGCAAGCGCTGGA
AGCGAAAATCGCCAAACTGGAAGCTGACCAGGGGCGCAAGCTAAAAAAAACGGAAAAAGACTCACTGAAAGATGAAGTGC
TGCACTCACTGCTGCCGCGCGCCTTTAGCCGTTTTAGTCAGACAATGATGTGGATCGACACCGTTAATGGTCTGATCATG
GTCGATTGCGCAAGCGCTAAAAAAGCGGAAGATACGCTGGCGCTGCTGCGTAAAAGCCTCGGCTCGCTGCCGGTGGTTCC
GCTGGCGCTGGAAAATCCTATCGAGCTGACGCTCACCGAATGGGTGCGTTCCGGTACGGTGGCGCAGGGATTCCAGTTGC
TGGACGAAGCAGAGCTGAAAGCAATGCTGGAAGACGGCGGCGTGATCCGCGCGAAGAAACAGGATCTGGTCAGCGACGAG
ATCGCCGTGCACATTGAAGCGGGTAAAGTGGTCACGAAACTGGCGCTCGACTGGCAGCAGCGCATTCAGTTCTTGATCTG
CGATGACGGTTCGATCAAACGCCTGAAGTTCAGCGATGAACTGCGCGATCAAAACGAAGATATCGATCGCGAAGACTACG
CTCAGCGTTTTGATGCCGATTTCATTCTGATGACGGGTGAGTTGGCGGCGTTAATTCAAAGCCTGGTTGAAGGTCTGGGC
GGCGAAGCGCAACGCTAA

Protein sequence :
MQARRQFVIIPAGFNDKAVEIIMLWFKNLMVYRLSRDISLRAEEMEKQLASMTFTPCGSQDMAKMGWVPPMGSHSDALTH
TANGQIIICARKEEKILPSPVIKQALEAKIAKLEADQGRKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIM
VDCASAKKAEDTLALLRKSLGSLPVVPLALENPIELTLTEWVRSGTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDE
IAVHIEAGKVVTKLALDWQQRIQFLICDDGSIKRLKFSDELRDQNEDIDREDYAQRFDADFILMTGELAALIQSLVEGLG
GEAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-92 62