Gene Information

Name : CKO_02645 (CKO_02645)
Accession : YP_001454189.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2448062 - 2448748 bp
Length : 687 bp
Strand : -
Note : KEGG: pen:PSEEN1885 1.4e-61 ABC transporter, ATP-binding protein; COG: COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence : 
ATGCCAGCGGAAAACATTGTTGAAGTTCATCGTCTTAAGAAGTCCGTCGGTCAGGGTGAGCATGAGCTTTCCATCCTTAC
CGGAGTTGAACTGGTTGTCAAACGCGCCGAGACTATTGCGCTGATCGGCGAGTCAGGATCGGGGAAATCGACGCTGCTGG
CGATTCTGGCCGGGCTGGATGATGGCAGCAGCGGCGAGGTGAATCTGGTCGGGCAGTCTCTGCACACGATGGATGAAGAG
GCGCGGGCGCAGCTGCGCGCGCAGCATGTCGGCTTTGTTTTCCAGTCTTTTATGTTGATTCCCACGCTGAATGCCCTGGA
AAACGTTGAACTGCCCGCCTTGCTGCGGGGAGAGAACAGCGGGAAAAGCCGCGATGGCGCGAAAGCGTTGCTGGAACAGT
TAGGTCTGGGAAAACGTCTTGATCATCTTCCGGCTCAGCTTTCCGGCGGCGAGCAGCAGCGTGTGGCGCTGGCGAGAGCG
TTCAACGGGCGGCCAGACGTGCTGTTTGCCGATGAACCGACGGGAAACCTTGACCGGCAGACCGGGGATAAAATCGCCGA
CCTGCTGTTTTCGCTTAATCGCGAACATGGCACCACCCTGATTCTGGTGACGCACGACCCGCAGCTGGCGGCGCGTTGCG
ACCGACGATTACGCCTGGTGGATGGGCAGTTGCAGGAGGAGGCATGA

Protein sequence : 
MPAENIVEVHRLKKSVGQGEHELSILTGVELVVKRAETIALIGESGSGKSTLLAILAGLDDGSSGEVNLVGQSLHTMDEE
ARAQLRAQHVGFVFQSFMLIPTLNALENVELPALLRGENSGKSRDGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDPQLAARCDRRLRLVDGQLQEEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_02645 YP_001454189.1 putative ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 3e-41 46
CKO_02645 YP_001454189.1 putative ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 1e-35 46
CKO_02645 YP_001454189.1 putative ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 4e-36 41