Gene Information

Name : CKO_02626 (CKO_02626)
Accession : YP_001454170.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 2431983 - 2432675 bp
Length : 693 bp
Strand : -
Note : COG: COG3121 P pilus assembly protein, chaperone PapD; Psort location: extracellular, including cell wall, score: 9

DNA sequence : 
ATGCTTAATTATATAAAATCAGGCCTTATTATTTTTATTGCCTTATGGACTTCAATGAGTGCGCAGGCGGCCGGGGGAAT
TGCATTAGGCGCCACCCGCGTTATTTATCCGGCGGACGCCAAACAGACTTCGCTGGCAATTAGCAACAGCGCATCGAAAG
AGCGTTATCTGGTTAATTCATGGATTGAGAACAGCGCCGGCGTCAAAGAAAAATCGTTCGTTGTTACACCGCCGCTGTTT
GTCAGCGAACCCAAAAGTGAAAACACGCTGCGTATTATTTATGCCGGACAGCCCCTGCCTGCCGATCGGGAGTCTTTGTT
CTGGATGAACGTGAAAGCGATACCGTCGGTGGATAAAAACAGCCTTGAAGGCAAAAACGTCCTGCAACTGGCGATCCTGT
CGCGCATTAAGCTGTTTGTTCGCCCTGCCAATCTGCCGCAGGTGCAGGAAGACGCGCCAGGAATGCTGCAATTCTCCCGT
TCCGGGAACCACCTGAAAATCACCAATCCGTCTGCTTACTATCTCACGCTGGTCAATCTCAAAGTGGGAAATCAGAAGGT
TGATAACGTCATGGTCGCGCCGAAGAACAATACCCAGATTCTGCTTCCGGCAGGCGCGCAGGGAAGTGTGACGTTCCAGA
CGGTAAATGATTACGGTGCGCTGACACCGGCGAAAACGGTTAGCTTGCGCTGA

Protein sequence : 
MLNYIKSGLIIFIALWTSMSAQAAGGIALGATRVIYPADAKQTSLAISNSASKERYLVNSWIENSAGVKEKSFVVTPPLF
VSEPKSENTLRIIYAGQPLPADRESLFWMNVKAIPSVDKNSLEGKNVLQLAILSRIKLFVRPANLPQVQEDAPGMLQFSR
SGNHLKITNPSAYYLTLVNLKVGNQKVDNVMVAPKNNTQILLPAGAQGSVTFQTVNDYGALTPAKTVSLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-53 53
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 8e-49 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_02626 YP_001454170.1 hypothetical protein VFG0445 Protein 5e-87 80
CKO_02626 YP_001454170.1 hypothetical protein VFG1644 Protein 5e-49 53
CKO_02626 YP_001454170.1 hypothetical protein VFG0911 Protein 5e-49 53
CKO_02626 YP_001454170.1 hypothetical protein VFG0875 Protein 1e-54 51
CKO_02626 YP_001454170.1 hypothetical protein VFG0455 Protein 5e-39 42