Gene Information

Name : CKO_02558 (CKO_02558)
Accession : YP_001454103.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG1475
EC number : -
Position : 2360096 - 2360713 bp
Length : 618 bp
Strand : +
Note : COG: COG1475 Predicted transcriptional regulators; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGCAACAGCGACTCACCCAACAAATAACCGACTTTCTCTCCACGCTGAACGAAGAAGAGAGAATTGCGGCAATCAACGA
ATTCAGGATGGCGATCCACCGCGTCAGCCCCTTTCGTGATCAGCCGGTAGACTGCGTGCAATGGGTAAAAAACGAACAAA
TCGAACCTAATGATTACAACCCAAACAATGTGGCGCCCCCGGAGAAAAGGCTCCTGCTAAAGTCTATTGAGGTAGATGGC
TTCACGCAGCCTATTGTCGTTGCAGAAACGGCGGCAGAAAAATATGAAATCGTGGATGGCTTTCACCGTCACGAACTCGG
TAAAGGGAAATCCACATTACGCTCAAAGTTAAAAGGCTATCTTCCCGTCACCTGTCTGGAACGCAATCGCCATGAACGAA
TTGCGGCGACCATTCGTCACAACCGCGCCCGTGGTCGTCATCAGATTCACGCGATGTCGGAAATTGTGCGAGAACTCTCC
CTGTTGGGCTGGGACGAGACGCGAATCGGAAAAGAGCTGGGCATGGATAAAGATGAAGTCCTGCGTCTGAAACAAATCAA
CGGCCTACAGGAACTCTTTGCCGACCGTCGATTCTCCAAAGCCTGGACCGTAAAGTAA

Protein sequence :
MQQRLTQQITDFLSTLNEEERIAAINEFRMAIHRVSPFRDQPVDCVQWVKNEQIEPNDYNPNNVAPPEKRLLLKSIEVDG
FTQPIVVAETAAEKYEIVDGFHRHELGKGKSTLRSKLKGYLPVTCLERNRHERIAATIRHNRARGRHQIHAMSEIVRELS
LLGWDETRIGKELGMDKDEVLRLKQINGLQELFADRRFSKAWTVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1204 NP_286739.1 hypothetical protein Not tested TAI Protein 3e-52 61
Z1644 NP_287147.1 hypothetical protein Not tested TAI Protein 3e-52 61
Z1644 AAQ19140.1 putative ParB-like nuclease Not tested PAI I CL3 Protein 8e-53 58
ibrB ADD91736.1 predicted transcriptional regulator IbrB Not tested PAI-I AL862 Protein 8e-53 58
STY4584 NP_458668.1 conserved hypothetical protein Not tested SPI-7 Protein 1e-53 58
z1204 CAD33764.1 Z1204 protein Not tested PAI I 536 Protein 2e-53 58
t4278 NP_807876.2 hypothetical protein Not tested SPI-7 Protein 9e-54 56
ORF_30 AAZ04440.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 2e-39 53
APECO1_3503 YP_854305.1 hypothetical protein Not tested PAI I APEC-O1 Protein 2e-39 53
c5208 NP_757056.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-39 53
ef0120 AAM75321.1 EF0120 Not tested Not named Protein 8e-32 50
EF0607 NP_814365.1 ParB-like nuclease domain-containing protein Not tested Not named Protein 1e-31 50
M5005_Spy_0164 YP_281528.1 parB-like nuclease Not tested Not named Protein 2e-32 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_02558 YP_001454103.1 hypothetical protein VFG1505 Protein 7e-54 58