Gene Information

Name : CKO_02246 (CKO_02246)
Accession : YP_001453805.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2083318 - 2084025 bp
Length : 708 bp
Strand : -
Note : KEGG: fal:FRAAL1628 1.3e-49 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGAAGCAGATCCTGCTGGTGGAAGATGACCACGACATCGCGGCGCTCCTGCGCCTCAATTTAGAAGACGAAGGCTACGC
CATTACTCACCAACCGGATGGGGGCAAGGCGTTACAGTGCCTTGAAACCCAACCCTGGGATGCCGTGATCCTCGACCTGA
TGCTCCCCAACGTTGACGGTCTGGAAATTTGTCGTCGCATCCGTCAGATGACCCGCTACCTGCCGGTGATTATCATCAGC
GCCCGCAGCAGCGAAACGGACCGCATTACCGGGCTGGAAACCGGGGCAGATGATTACCTGGCAAAACCCTTCTCGGTGCA
GGAGCTGATCGCGCGCATCAAAGCGCTGTTTCGCCGTCAGCAGGCTATGGGGCAGGCACAGACTGCCGGGCATATTCAGG
CTCATGGCCTGACGCTTGATCCGCTGGCGCGTACGGTGCGCCTGCACGGTCAGGATGTGGACCTCACGCCGCGTGAATTT
GAGCTACTGTACTTCTTTGCCCGTCATCCAGGCGAAGTCTTTTCGCGTCTGGCGCTGCTGGAACAGGTCTGGGGCTATCA
GCACGAAGGGTATGAGCACACCGTCAACACCCACATTAATCGCCTGCGTATCAAGATTGAAAAAGATGCCGCTGAACCGG
AGATTATTCGTACCGTCTGGGGCAAAGGTTACAAATTTGCGGAGCTGAACCATGATACGGCGCTTTAG

Protein sequence :
MKQILLVEDDHDIAALLRLNLEDEGYAITHQPDGGKALQCLETQPWDAVILDLMLPNVDGLEICRRIRQMTRYLPVIIIS
ARSSETDRITGLETGADDYLAKPFSVQELIARIKALFRRQQAMGQAQTAGHIQAHGLTLDPLARTVRLHGQDVDLTPREF
ELLYFFARHPGEVFSRLALLEQVWGYQHEGYEHTVNTHINRLRIKIEKDAAEPEIIRTVWGKGYKFAELNHDTAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-80 74
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 5e-80 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_02246 YP_001453805.1 hypothetical protein NC_012469.1.7685629. Protein 4e-43 45
CKO_02246 YP_001453805.1 hypothetical protein NC_013450.8614146.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_002951.3238224.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein AE015929.1.gene1106. Protein 5e-35 42
CKO_02246 YP_001453805.1 hypothetical protein NC_007793.3914065.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_002758.1121390.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_010079.5776364.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_002952.2859858.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_007622.3794948.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_003923.1003417.p0 Protein 1e-39 42
CKO_02246 YP_001453805.1 hypothetical protein NC_012469.1.7686381. Protein 2e-43 42
CKO_02246 YP_001453805.1 hypothetical protein AF155139.2.orf0.gene Protein 6e-44 42
CKO_02246 YP_001453805.1 hypothetical protein HE999704.1.gene2815. Protein 9e-42 41
CKO_02246 YP_001453805.1 hypothetical protein AE000516.2.gene3505. Protein 6e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_02246 YP_001453805.1 hypothetical protein VFG1563 Protein 3e-80 74
CKO_02246 YP_001453805.1 hypothetical protein VFG1702 Protein 2e-80 74
CKO_02246 YP_001453805.1 hypothetical protein VFG1389 Protein 2e-34 42