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Name : CKO_02228 (CKO_02228) Accession : YP_001453787.1 Strain : Citrobacter koseri ATCC BAA-895 Genome accession: NC_009792 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 2069732 - 2071654 bp Length : 1923 bp Strand : - Note : COG: COG1450 Type II secretory pathway, component PulD; Psort location: extracellular, including cell wall, score: 9 DNA sequence : ATGAAGAAATTTCCATGGGCGTGCGTGGCGCTGACAACTCTGGCGTTATATTCCAGTTCGCTCTTTGCGGCGAATTTTAG CGCCAGCTTTAAAAATACTGATATTCGTGAATTTATTGATACGGTTGGCCGTAATCTTAATAAAACGATTCTGGTCGATC CGTCGGTACAGGGAACCGTATCAGTTCGGACGTATAACGTCCTGACCGAAGATGAATACTATCAGTTTTTCCTCAGCGTG CTGGATTTGTACGGACTTTCCGTGATTCCGATGGATAACGGCATGGTGAAAGTGGTTCGTTCGTCCGTTGCGAGAACCGC GGGAACGCCGATTGCCGACAGCAAAAATCCCGGTAAAGGGGATGAAATTATTACCCGCGTCGTGCGGATGGAAAATGTAC CGGTACGCGAACTGGCGCCGCTGTTGCGCCAGCTGAACGATGCGACCGGTATCGGCAACGTGGTGCATTTTGAGCCGTCG AACGTCCTGCTGCTCACCGGTAAAGCCTCGGTGGTGAACCGCCTGGTCGATCTGGTTCAGCGCGTCGATCGTTCCGGCGT ACAGCGGCGCGAAATCGTTCCGCTGCATTACGCCTCTGCGAAAGAACTTTCGGATATGTTGAATAACCTCAACAACGAAG AGCAAAAAGGGCAGAACGCACCGCAACTGGCGACCAAAGTGGTGGCGGATGAGGAGACGAATAGCCTGGTCATTAGCGGC AGCGAAGAAGCGCGGGCGCGTACCCGCACGCTGATAGCGCAGCTTGATCGCGAGCAGAATAACGAGGGGAATACCCGCGT CTTTTACCTGAAATATGCCAATGCCGCCAAAGTGGTGCCGGTGTTAACGGGCATTGGAGAGCAGATGAAGGACAAGCCGG GCGCGGCGAAAAGTAAATCGCCGGTTGCCGCGACCGATCTGAATATTACTGCCGACGAGTCGACAAACTCACTGGTGATC ACCGCGCAGCCGAACGTGATGAACTCGCTTGAGAAGGTGATCGACAAGCTGGACATTCGCCGTCCCCAGGTACTGGTGGA AGCCATTATCGCTGAAGTGCAGGATGGCGCCGGAACCGATCTCGGCGTGCAGTGGACGAGTAAACACGGCGGCGTACAGT TTGGCGCAACCGGTCTGCCGATCGGCCAGGTTAAGAACGGGACGATAAAAGGCGTGAATTTTACCGGTATGGCGACAGGT TTCTTTAACGGCGATTTCGGCGCGCTGATGACGGCGCTGTCGACCAACGGCAAAAACGACATTCTCTCCACGCCGAGCGT GGTGACGCTGGATAACAAAGAAGCGTCGTTTAACGTTGGTCAGGATGTGCCGGTGCTTTCTGGTTCGCAGACGACGACGG GCGACAACGTCTTTAACACCGTTGAGCGTAAGACGGTGGGGACGAAGTTGAAGATCCTGCCGCAGATTAATGATGGCGAC ATGATCCACATGAAGATCGAGCAGGAAGTTTCCAGCGTGGACGCCAGTTCGACGGAGGATTCGTCTTTAGGCCCAACCTT TAACACCCGCACGATCAATAACGAAGTGATGGTTCACAGCGGGCAGACGGTAGTGCTGGGAGGGCTTATCGAAAATGTCA CCAAACAGAATGTGTCGAAAGTGCCGCTGCTTGGCGATATTCCTCTGGTGGGGCAACTGTTCCGCTACACCTCGCAGGAT ACCACCAAGCGAAACCTGATGGTCTTTATCCATACCACCGTTCTGCGCGATGACGACAACTACAGCGCCGCGTCGAAAGA GAAATACGACCAGGTGCGCGCGCGCCAGCAGCAGCGTATGGAGGAGAAAAAAATGGGCATCCTGGAGCCGGGTGATAACG CCATTCTGCCCGCGTTCCCGTCGCCCGTAAACACCAGCACTGCTGCGCCAGCCACGGCGTCGCGCAATCCGTTTAAAGAG TAA Protein sequence : MKKFPWACVALTTLALYSSSLFAANFSASFKNTDIREFIDTVGRNLNKTILVDPSVQGTVSVRTYNVLTEDEYYQFFLSV LDLYGLSVIPMDNGMVKVVRSSVARTAGTPIADSKNPGKGDEIITRVVRMENVPVRELAPLLRQLNDATGIGNVVHFEPS NVLLLTGKASVVNRLVDLVQRVDRSGVQRREIVPLHYASAKELSDMLNNLNNEEQKGQNAPQLATKVVADEETNSLVISG SEEARARTRTLIAQLDREQNNEGNTRVFYLKYANAAKVVPVLTGIGEQMKDKPGAAKSKSPVAATDLNITADESTNSLVI TAQPNVMNSLEKVIDKLDIRRPQVLVEAIIAEVQDGAGTDLGVQWTSKHGGVQFGATGLPIGQVKNGTIKGVNFTGMATG FFNGDFGALMTALSTNGKNDILSTPSVVTLDNKEASFNVGQDVPVLSGSQTTTGDNVFNTVERKTVGTKLKILPQINDGD MIHMKIEQEVSSVDASSTEDSSLGPTFNTRTINNEVMVHSGQTVVLGGLIENVTKQNVSKVPLLGDIPLVGQLFRYTSQD TTKRNLMVFIHTTVLRDDDNYSAASKEKYDQVRARQQQRMEEKKMGILEPGDNAILPAFPSPVNTSTAAPATASRNPFKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 1e-120 | 43 |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-113 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CKO_02228 | YP_001453787.1 | hypothetical protein | VFG2047 | Protein | 3e-112 | 42 |
