Gene Information

Name : CKO_02052 (CKO_02052)
Accession : YP_001453613.1
Strain : Citrobacter koseri ATCC BAA-895
Genome accession: NC_009792
Putative virulence/resistance : Resistance
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1902123 - 1902818 bp
Length : 696 bp
Strand : -
Note : KEGG: rru:Rru_A2804 1.8e-68 ABC transporter component K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: cytoplasmic, score: 23

DNA sequence :
ATGTCCGTTACGCATATCCCTCAGGTGGCGATCGAAACCCGCCACTTATACAAACGGTTCGGTGACGTTACCGCCCTGGA
TGACATTAATCTGCGCATTGCGCAGGGTGAATTTGTCGCCATTATGGGCGCTTCTGGTTCTGGTAAAACCACGCTGATGA
ATATTCTGACGTGCCTTGATACGGCGACGGAAGGGCAGGTGTTTCTTGACGGCACCGATGCCGCCGCGCTGGATGAAGAG
GGGCGTCGTCGCTTTCGCGCCGAGAAAATCGGCCTGGTATTTCAGCAGTTCCATTTGATCCCGTTCTTAACTGCGCTGGA
AAACATCATGCTCGCCCAGCATTACCACAGCGTGGTGGATGAAGCGGCGGCGAGGAAGGTGCTGGAGCAGGTAGGGCTTG
GGCATCGTGTGACGCACCTGCCGAGCCAGCTTTCCGGTGGTGAGCAGCAGCGTGTGTGTATCGCCCGGGCGCTGGTCAAC
GAACCGCCGGTTATTTTCGCGGATGAACCGACGGGCAACCTGGATGAAGAGAATGAGCAGCGGGTGCTGGATCTGCTCAC
CGATCTGCATCGTCAGGGGCGCACGATTGTGATGGTGACGCACAACCCTGCGCTTGGGCAGTTTGCCGACCGTATTCTGC
GGCTGCAACACGGTAAATATCTGGGTGAGGAGGCCAATCAACATGCGCTGGCATAA

Protein sequence :
MSVTHIPQVAIETRHLYKRFGDVTALDDINLRIAQGEFVAIMGASGSGKTTLMNILTCLDTATEGQVFLDGTDAAALDEE
GRRRFRAEKIGLVFQQFHLIPFLTALENIMLAQHYHSVVDEAAARKVLEQVGLGHRVTHLPSQLSGGEQQRVCIARALVN
EPPVIFADEPTGNLDEENEQRVLDLLTDLHRQGRTIVMVTHNPALGQFADRILRLQHGKYLGEEANQHALA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-28 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CKO_02052 YP_001453613.1 hypothetical protein NC_008702.1.4606598. Protein 6e-33 46
CKO_02052 YP_001453613.1 hypothetical protein CP001581.1.gene798.p Protein 6e-36 45
CKO_02052 YP_001453613.1 hypothetical protein NC_012469.1.7686878. Protein 3e-45 45
CKO_02052 YP_001453613.1 hypothetical protein NC_012469.1.7685735. Protein 8e-40 44